RNA id: TCONS_00029494


Basic Information

Item Value
RNA id TCONS_00029494
length 125
RNA type rRNA
GC content 0.46
exon number 1
gene id XLOC_014958
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 38062000 ~ 38062124 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AATGacagtcatatcaccctgcagcccagtATTACAGTttcggttactcactgaagctgagcagggctgagcctggtcagtatctaGATGGGAGAatacatgggaaaactaggttgctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000115566

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00030318 lncRNA downstream 483285 37577852 ~ 37578715 (-) True XLOC_014955
TCONS_00030317 lncRNA downstream 490134 37569624 ~ 37571866 (-) True XLOC_014954
TCONS_00030316 lncRNA downstream 491072 37569624 ~ 37570928 (-) False XLOC_014954
TCONS_00030315 lncRNA downstream 492967 37567811 ~ 37569033 (-) True XLOC_014953
TCONS_00030314 lncRNA downstream 493211 37522577 ~ 37568789 (-) False XLOC_014953
TCONS_00030319 lncRNA upstream 261151 38323275 ~ 38372998 (-) True XLOC_014959
TCONS_00029500 lncRNA upstream 420365 38482489 ~ 38487275 (-) False XLOC_014963
TCONS_00030320 lncRNA upstream 618775 38680899 ~ 38688614 (-) True XLOC_014964
TCONS_00029507 lncRNA upstream 1365056 39427180 ~ 39579002 (-) False XLOC_014967
TCONS_00029506 lncRNA upstream 1365056 39427180 ~ 39579002 (-) False XLOC_014967
TCONS_00029491 mRNA downstream 553429 37501652 ~ 37508571 (-) True XLOC_014952
TCONS_00029489 mRNA downstream 907564 37153409 ~ 37154436 (-) True XLOC_014950
TCONS_00029488 mRNA downstream 1421323 36503112 ~ 36640677 (-) True XLOC_014947
TCONS_00029486 mRNA downstream 1660718 36378302 ~ 36401282 (-) False XLOC_014947
TCONS_00029485 mRNA downstream 1827815 36217138 ~ 36234185 (-) False XLOC_014947
TCONS_00029495 mRNA upstream 325131 38387255 ~ 38419575 (-) True XLOC_014960
TCONS_00029498 mRNA upstream 411634 38473758 ~ 38539670 (-) False XLOC_014963
TCONS_00029499 mRNA upstream 412443 38474567 ~ 38611814 (-) False XLOC_014963
TCONS_00029501 mRNA upstream 446165 38508289 ~ 38517343 (-) True XLOC_014963
TCONS_00029502 mRNA upstream 704489 38766613 ~ 38872650 (-) False XLOC_014965
TCONS_00029493 other downstream 33382 38028498 ~ 38028618 (-) True XLOC_014957
TCONS_00029492 other downstream 424507 37637374 ~ 37637493 (-) True XLOC_014956
TCONS_00029490 other downstream 833975 37227910 ~ 37228025 (-) True XLOC_014951
TCONS_00029481 other downstream 2596420 35462382 ~ 35465580 (-) True XLOC_014944
TCONS_00029473 other downstream 2633106 35421677 ~ 35428894 (-) True XLOC_014941
TCONS_00029496 other upstream 402003 38464127 ~ 38464249 (-) True XLOC_014961
TCONS_00029497 other upstream 402171 38464295 ~ 38464413 (-) True XLOC_014962
TCONS_00029505 other upstream 1141494 39203618 ~ 39203735 (-) True XLOC_014966
TCONS_00029512 other upstream 2120610 40182734 ~ 40186263 (-) True XLOC_014972
TCONS_00029518 other upstream 2574448 40636572 ~ 40636691 (-) True XLOC_014976