RNA id: TU329986



Basic Information


Item Value
RNA id TU329986
length 249
lncRNA type intronic
GC content 0.63
exon number 2
gene id G291010
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69029480 ~ 69030775 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggagaggtggaggagtggagaggtggaggagtggagaggtggagtggtggaAAGTTGGacgggtggaggggtagaggggtggagagtggagaggtggaggggtggaggagtggaggggttgaggagtggagaggaggaggggtagagtggtggaggagtggagaggaggagaggtggaggagtggagaggtggaggagtggagaggtggaggagtggagaggaggaggggtggaggagtggagaggtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU329929 lncRNA downstream 113975 68914754 ~ 68915505 (-) True G290954
TU329656 lncRNA downstream 175122 68853632 ~ 68854358 (-) False G290715
TU329659 lncRNA downstream 175122 68854018 ~ 68854358 (-) True G290715
TU329657 lncRNA downstream 175566 68853445 ~ 68853914 (-) False G290715
TU329658 lncRNA downstream 175566 68853632 ~ 68853914 (-) False G290715
TU330049 lncRNA upstream 97666 69128441 ~ 69128971 (-) True G291070
TU330069 lncRNA upstream 122437 69153212 ~ 69153420 (-) True G291087
TU330075 lncRNA upstream 129396 69160171 ~ 69160382 (-) True G291093
TU330080 lncRNA upstream 143562 69174337 ~ 69203968 (-) True G291098
TU330122 lncRNA upstream 224685 69255460 ~ 69255892 (-) True G291137
XR_002472988.2 mRNA downstream 442738 68584472 ~ 68586742 (-) True LOC110520471
XM_021597813.2 mRNA downstream 568901 68455461 ~ 68460579 (-) False LOC110520470
XM_021597811.2 mRNA downstream 736730 68278572 ~ 68292750 (-) True LOC110520467
XM_021597810.2 mRNA downstream 736731 68278572 ~ 68292749 (-) False LOC110520467
XM_021597808.2 mRNA downstream 776239 68227272 ~ 68253241 (-) True LOC110520466
XM_021597817.2 mRNA upstream 229728 69260503 ~ 69277276 (-) False LOC110520474
XM_036975027.1 mRNA upstream 349692 69380467 ~ 69469698 (-) True LOC110520476
XM_021597820.2 mRNA upstream 565062 69595837 ~ 69614655 (-) True LOC110520477
XM_021597827.2 mRNA upstream 610491 69641266 ~ 69644739 (-) False LOC110520480
XM_021597828.2 mRNA upstream 618762 69649537 ~ 69675010 (-) False ankrd10b
TU329646 other downstream 178626 68846611 ~ 68850854 (-) True G290713
TU329520 other downstream 304566 68721808 ~ 68724914 (-) True G290602
TU329515 other downstream 312095 68710367 ~ 68717385 (-) True G290598
TU329467 other downstream 381860 68626332 ~ 68647620 (-) True G290567
TU329440 other downstream 448773 68579103 ~ 68580707 (-) True G290542
TU330123 other upstream 225230 69256005 ~ 69256544 (-) True G291138
TU330998 other upstream 949571 69980346 ~ 69996605 (-) True G291901
TU331092 other upstream 1076765 70107540 ~ 70107950 (-) True G291977
TU332000 other upstream 1689261 70720036 ~ 70720591 (-) True G292753
TU332200 other upstream 1996844 71027619 ~ 71040152 (-) True G292919

Expression Profile