RNA id: TCONS_00029496


Basic Information

Item Value
RNA id TCONS_00029496
length 123
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_014961
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 38464127 ~ 38464249 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgtgggtcctaatgccccttTATAGCGACAGGGACACTATTCTGCTcagtgaagctaagcagggctgcacccggtcagtacctggatcggagaccatatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000116255

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00030319 lncRNA downstream 91129 38323275 ~ 38372998 (-) True XLOC_014959
TCONS_00030318 lncRNA downstream 885412 37577852 ~ 37578715 (-) True XLOC_014955
TCONS_00030317 lncRNA downstream 892261 37569624 ~ 37571866 (-) True XLOC_014954
TCONS_00030316 lncRNA downstream 893199 37569624 ~ 37570928 (-) False XLOC_014954
TCONS_00030315 lncRNA downstream 895094 37567811 ~ 37569033 (-) True XLOC_014953
TCONS_00029500 lncRNA upstream 18240 38482489 ~ 38487275 (-) False XLOC_014963
TCONS_00030320 lncRNA upstream 216650 38680899 ~ 38688614 (-) True XLOC_014964
TCONS_00029507 lncRNA upstream 962931 39427180 ~ 39579002 (-) False XLOC_014967
TCONS_00029506 lncRNA upstream 962931 39427180 ~ 39579002 (-) False XLOC_014967
TCONS_00030321 lncRNA upstream 968068 39432317 ~ 39578903 (-) False XLOC_014967
TCONS_00029495 mRNA downstream 44552 38387255 ~ 38419575 (-) True XLOC_014960
TCONS_00029491 mRNA downstream 955556 37501652 ~ 37508571 (-) True XLOC_014952
TCONS_00029489 mRNA downstream 1309691 37153409 ~ 37154436 (-) True XLOC_014950
TCONS_00029488 mRNA downstream 1823450 36503112 ~ 36640677 (-) True XLOC_014947
TCONS_00029486 mRNA downstream 2062845 36378302 ~ 36401282 (-) False XLOC_014947
TCONS_00029498 mRNA upstream 9509 38473758 ~ 38539670 (-) False XLOC_014963
TCONS_00029499 mRNA upstream 10318 38474567 ~ 38611814 (-) False XLOC_014963
TCONS_00029501 mRNA upstream 44040 38508289 ~ 38517343 (-) True XLOC_014963
TCONS_00029502 mRNA upstream 302364 38766613 ~ 38872650 (-) False XLOC_014965
TCONS_00029503 mRNA upstream 318976 38783225 ~ 38830582 (-) False XLOC_014965
TCONS_00029494 other downstream 402003 38062000 ~ 38062124 (-) True XLOC_014958
TCONS_00029493 other downstream 435509 38028498 ~ 38028618 (-) True XLOC_014957
TCONS_00029492 other downstream 826634 37637374 ~ 37637493 (-) True XLOC_014956
TCONS_00029490 other downstream 1236102 37227910 ~ 37228025 (-) True XLOC_014951
TCONS_00029481 other downstream 2998547 35462382 ~ 35465580 (-) True XLOC_014944
TCONS_00029497 other upstream 46 38464295 ~ 38464413 (-) True XLOC_014962
TCONS_00029505 other upstream 739369 39203618 ~ 39203735 (-) True XLOC_014966
TCONS_00029512 other upstream 1718485 40182734 ~ 40186263 (-) True XLOC_014972
TCONS_00029518 other upstream 2172323 40636572 ~ 40636691 (-) True XLOC_014976
TCONS_00029522 other upstream 2316919 40781168 ~ 40781271 (-) True XLOC_014978