RNA id: TU331086



Basic Information


Item Value
RNA id TU331086
length 200
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G291971
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70104174 ~ 70104373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


Ttgttagagagagaaagtgagaactttctgtctctgtctctctctgtctctctctgtctctctctgtctctctcggtctctctctgtctctctcggtctctctctgtctctctctgtctctctctgtctctctctgtctctctctgtctctctcggtctctctctgtctctctctgtctctctcggtctctctctgtctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU331076 lncRNA upstream 6592 70097372 ~ 70097582 (+) True G291961
TU331075 lncRNA upstream 7175 70096793 ~ 70096999 (+) True G291960
TU330529 lncRNA upstream 69409 70032001 ~ 70034765 (+) False LOC110520491
TU331111 lncRNA downstream 16973 70121346 ~ 70122502 (+) True G291995
TU331123 lncRNA downstream 37809 70142182 ~ 70142708 (+) True G292005
TU331173 lncRNA downstream 112246 70216619 ~ 70223514 (+) True G292052
TU331184 lncRNA downstream 147386 70251759 ~ 70252589 (+) True G292061
TU331207 lncRNA downstream 192138 70296511 ~ 70296839 (+) True G292081
XM_021597866.2 mRNA upstream 11367 70072804 ~ 70092807 (+) True LOC110520495
XM_021597860.2 mRNA upstream 33704 70057402 ~ 70070470 (+) False LOC110520493
XM_021597859.2 mRNA upstream 33704 70057410 ~ 70070470 (+) False LOC110520493
XM_021597862.2 mRNA upstream 33704 70060415 ~ 70070470 (+) False LOC110520493
XR_002472992.2 mRNA upstream 33843 70057383 ~ 70070331 (+) False LOC110520493
XM_036975051.1 mRNA downstream 127182 70231555 ~ 70251197 (+) False LOC110518747
XM_036975052.1 mRNA downstream 127182 70231555 ~ 70251197 (+) False LOC110518747
XM_036975050.1 mRNA downstream 127183 70231556 ~ 70251197 (+) False LOC110518747
XM_036975049.1 mRNA downstream 127184 70231557 ~ 70251197 (+) False LOC110518747
XR_005051366.1 mRNA downstream 127184 70231557 ~ 70281289 (+) False LOC110518747
TU330553 other upstream 33817 70057540 ~ 70070357 (+) True LOC110520493
TU330474 other upstream 152006 69949667 ~ 69952168 (+) True G291461
TU330486 other upstream 182055 69919182 ~ 69922119 (+) True LOC110504602
TU330385 other upstream 233962 69862060 ~ 69870212 (+) True LOC110520485
TU330321 other upstream 408338 69695395 ~ 69695836 (+) True G291327
TU331609 other downstream 472745 70577118 ~ 70581089 (+) False LOC110520507
TU331610 other downstream 472745 70577118 ~ 70581089 (+) False LOC110520507
TU331619 other downstream 472745 70577118 ~ 70581089 (+) False LOC110520507
TU332513 other downstream 1261810 71366183 ~ 71366423 (+) True G293204
TU332454 other downstream 1352068 71456441 ~ 71477947 (+) False il1rapl1a

Expression Profile