RNA id: TCONS_00029505



Basic Information


Item Value
RNA id TCONS_00029505
length 118
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_014966
representative True

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 39203618 ~ 39203735 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GGCCatagccatgtcaccctgcagcccaagaacaGTTACTCACTGAAACTAAGCTGGGCTGAGCccgatcagtacctggatgggcgACCACATTGGGAAAACTAGATTGCTGTTGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000164074

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00030320 lncRNA downstream 515004 38680899 ~ 38688614 (-) True XLOC_014964
TCONS_00029500 lncRNA downstream 716343 38482489 ~ 38487275 (-) False XLOC_014963
TCONS_00030319 lncRNA downstream 830620 38323275 ~ 38372998 (-) True XLOC_014959
TCONS_00030318 lncRNA downstream 1624903 37577852 ~ 37578715 (-) True XLOC_014955
TCONS_00030317 lncRNA downstream 1631752 37569624 ~ 37571866 (-) True XLOC_014954
TCONS_00029507 lncRNA upstream 223445 39427180 ~ 39579002 (-) False XLOC_014967
TCONS_00029506 lncRNA upstream 223445 39427180 ~ 39579002 (-) False XLOC_014967
TCONS_00030321 lncRNA upstream 228582 39432317 ~ 39578903 (-) False XLOC_014967
TCONS_00029508 lncRNA upstream 356975 39560710 ~ 39579002 (-) True XLOC_014967
TCONS_00029509 lncRNA upstream 384861 39588596 ~ 39589155 (-) True XLOC_014968
TCONS_00029502 mRNA downstream 330968 38766613 ~ 38872650 (-) False XLOC_014965
TCONS_00029504 mRNA downstream 372898 38793238 ~ 38830720 (-) True XLOC_014965
TCONS_00029503 mRNA downstream 373036 38783225 ~ 38830582 (-) False XLOC_014965
TCONS_00029499 mRNA downstream 591804 38474567 ~ 38611814 (-) False XLOC_014963
TCONS_00029498 mRNA downstream 663948 38473758 ~ 38539670 (-) False XLOC_014963
TCONS_00029510 mRNA upstream 963628 40167363 ~ 40175800 (-) True XLOC_014971
TCONS_00029511 mRNA upstream 978906 40182641 ~ 40186328 (-) False XLOC_014972
TCONS_00029513 mRNA upstream 982942 40186677 ~ 40192249 (-) False XLOC_014973
TCONS_00029514 mRNA upstream 983793 40187528 ~ 40191358 (-) True XLOC_014973
TCONS_00029515 mRNA upstream 992727 40196462 ~ 40199081 (-) False XLOC_014974
TCONS_00029497 other downstream 739205 38464295 ~ 38464413 (-) True XLOC_014962
TCONS_00029496 other downstream 739369 38464127 ~ 38464249 (-) True XLOC_014961
TCONS_00029494 other downstream 1141494 38062000 ~ 38062124 (-) True XLOC_014958
TCONS_00029493 other downstream 1175000 38028498 ~ 38028618 (-) True XLOC_014957
TCONS_00029492 other downstream 1566125 37637374 ~ 37637493 (-) True XLOC_014956
TCONS_00029512 other upstream 978999 40182734 ~ 40186263 (-) True XLOC_014972
TCONS_00029518 other upstream 1432837 40636572 ~ 40636691 (-) True XLOC_014976
TCONS_00029522 other upstream 1577433 40781168 ~ 40781271 (-) True XLOC_014978
TCONS_00029535 other upstream 2149087 41352822 ~ 41371978 (-) False XLOC_014985
TCONS_00029546 other upstream 2969379 42173114 ~ 42173228 (-) True XLOC_014994