RNA id: TU331537



Basic Information


Item Value
RNA id TU331537
length 211
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G292371
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70458542 ~ 70458752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cccaattagaggccgctggttatcgttgtctctagttggggatcatacttaagtagcattttttccacctgtgggttatgggatattgtttatgtttagttgcctgttcgcATTGTCGTCACGGttagtttattatttatttgttttgtatttgcttaagtttcactttattcatacaaattatgtggaactctacgtacaCTGCTCCTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU331532 lncRNA downstream 2643 70455401 ~ 70455899 (-) True G292366
TU331486 lncRNA downstream 33736 70415892 ~ 70424806 (-) True G292327
TU331480 lncRNA downstream 81343 70376978 ~ 70377199 (-) True G292321
TU331477 lncRNA downstream 96209 70362071 ~ 70362333 (-) True G292318
TU331476 lncRNA downstream 99103 70359132 ~ 70359439 (-) True G292317
TU331584 lncRNA upstream 49935 70508687 ~ 70514874 (-) True G292402
TU331589 lncRNA upstream 61473 70520225 ~ 70521267 (-) True G292404
TU331552 lncRNA upstream 96749 70555501 ~ 70564655 (-) True G292384
TU331606 lncRNA upstream 114427 70573179 ~ 70574259 (-) True G292420
TU331906 lncRNA upstream 120672 70579424 ~ 70581094 (-) True G292669
LOC118964359 mRNA downstream 238078 70220330 ~ 70220464 (-) True LOC118964359
XM_036975048.1 mRNA downstream 323010 70125298 ~ 70135532 (-) True LOC110520496
XM_021597857.2 mRNA downstream 410149 70035040 ~ 70048393 (-) True LOC110520492
XM_021597856.2 mRNA downstream 410159 70035040 ~ 70048383 (-) False LOC110520492
XM_021597886.2 mRNA upstream 312404 70771156 ~ 70806536 (-) False LOC110520510
XM_036975066.1 mRNA upstream 312404 70771156 ~ 70806539 (-) False LOC110520510
XM_036975067.1 mRNA upstream 312404 70771156 ~ 70806540 (-) True LOC110520510
XM_021597888.2 mRNA upstream 348597 70807349 ~ 70810049 (-) True jagn1a
XM_021597890.2 mRNA upstream 351852 70810604 ~ 70837491 (-) True LOC110520512
TU331092 other downstream 350592 70107540 ~ 70107950 (-) True G291977
TU330998 other downstream 461937 69980346 ~ 69996605 (-) True G291901
TU330123 other downstream 1201998 69256005 ~ 69256544 (-) True G291138
TU329646 other downstream 1607688 68846611 ~ 68850854 (-) True G290713
TU329520 other downstream 1733628 68721808 ~ 68724914 (-) True G290602
TU332000 other upstream 261284 70720036 ~ 70720591 (-) True G292753
TU332200 other upstream 568867 71027619 ~ 71040152 (-) True G292919
TU333405 other upstream 1444562 71903314 ~ 71903908 (-) True G293984
TU333434 other upstream 1714297 72173049 ~ 72206798 (-) True LOC110504660
TU333986 other upstream 2112497 72571249 ~ 72575432 (-) True G294451

Expression Profile