Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00029510 |
| length | 986 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | XLOC_014971 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 40167363 ~ 40175800 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0030246 | carbohydrate binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050311-5 | Predicted to enable carbohydrate binding activity. Located in membrane. Is expressed in blood; intestine; kidney; and spleen. Orthologous to human CLEC4E (C-type lectin domain family 4 member E). |
| ensembl_id | ENSDART00000102904 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029793 | lncRNA | downstream | 408503 | 39755827 ~ 39758860 (-) | False | XLOC_014970 |
| TCONS_00029794 | lncRNA | downstream | 408503 | 39755906 ~ 39758860 (-) | False | XLOC_014970 |
| TCONS_00029795 | lncRNA | downstream | 408503 | 39756742 ~ 39758860 (-) | True | XLOC_014970 |
| TCONS_00030326 | lncRNA | downstream | 408505 | 39754776 ~ 39758858 (-) | False | XLOC_014970 |
| TCONS_00030325 | lncRNA | downstream | 409185 | 39754776 ~ 39758178 (-) | False | XLOC_014970 |
| TCONS_00030327 | lncRNA | upstream | 148161 | 40323961 ~ 40328584 (-) | True | XLOC_014975 |
| TCONS_00030328 | lncRNA | upstream | 733975 | 40909775 ~ 40985253 (-) | False | XLOC_014981 |
| TCONS_00029796 | lncRNA | upstream | 745352 | 40921152 ~ 40922192 (-) | True | XLOC_014982 |
| TCONS_00030329 | lncRNA | upstream | 765310 | 40941110 ~ 40970080 (-) | False | XLOC_014981 |
| TCONS_00030330 | lncRNA | upstream | 765310 | 40941110 ~ 40970142 (-) | False | XLOC_014981 |
| TCONS_00029502 | mRNA | downstream | 1294713 | 38766613 ~ 38872650 (-) | False | XLOC_014965 |
| TCONS_00029504 | mRNA | downstream | 1336643 | 38793238 ~ 38830720 (-) | True | XLOC_014965 |
| TCONS_00029503 | mRNA | downstream | 1336781 | 38783225 ~ 38830582 (-) | False | XLOC_014965 |
| TCONS_00029499 | mRNA | downstream | 1555549 | 38474567 ~ 38611814 (-) | False | XLOC_014963 |
| TCONS_00029498 | mRNA | downstream | 1627693 | 38473758 ~ 38539670 (-) | False | XLOC_014963 |
| TCONS_00029511 | mRNA | upstream | 6841 | 40182641 ~ 40186328 (-) | False | XLOC_014972 |
| TCONS_00029513 | mRNA | upstream | 10877 | 40186677 ~ 40192249 (-) | False | XLOC_014973 |
| TCONS_00029514 | mRNA | upstream | 11728 | 40187528 ~ 40191358 (-) | True | XLOC_014973 |
| TCONS_00029515 | mRNA | upstream | 20662 | 40196462 ~ 40199081 (-) | False | XLOC_014974 |
| TCONS_00029516 | mRNA | upstream | 20662 | 40196462 ~ 40199098 (-) | False | XLOC_014974 |
| TCONS_00029505 | other | downstream | 963628 | 39203618 ~ 39203735 (-) | True | XLOC_014966 |
| TCONS_00029497 | other | downstream | 1702950 | 38464295 ~ 38464413 (-) | True | XLOC_014962 |
| TCONS_00029496 | other | downstream | 1703114 | 38464127 ~ 38464249 (-) | True | XLOC_014961 |
| TCONS_00029494 | other | downstream | 2105239 | 38062000 ~ 38062124 (-) | True | XLOC_014958 |
| TCONS_00029493 | other | downstream | 2138745 | 38028498 ~ 38028618 (-) | True | XLOC_014957 |
| TCONS_00029512 | other | upstream | 6934 | 40182734 ~ 40186263 (-) | True | XLOC_014972 |
| TCONS_00029518 | other | upstream | 460772 | 40636572 ~ 40636691 (-) | True | XLOC_014976 |
| TCONS_00029522 | other | upstream | 605368 | 40781168 ~ 40781271 (-) | True | XLOC_014978 |
| TCONS_00029535 | other | upstream | 1177022 | 41352822 ~ 41371978 (-) | False | XLOC_014985 |
| TCONS_00029546 | other | upstream | 1997314 | 42173114 ~ 42173228 (-) | True | XLOC_014994 |
