RNA id: TU333683



Basic Information


Item Value
RNA id TU333683
length 201
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G294209
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72283809 ~ 72284009 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tagccatttcacttcggttacaccagcctcatctggggagttgataggcttggagtcataaacagcgcagtgCTTGACGCACaaggaagagctgctggcaaaactcacgaaagtgctgtttgaatgaatgtttacgcgcctgcttctgcctaccaccgctcagtcagatacttagatacttgtatgctcagtcagattata

Function


GO: NA

KEGG:

id description

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU333672 lncRNA downstream 12103 72250813 ~ 72271706 (-) True G294198
TU333588 lncRNA downstream 40300 72238098 ~ 72243509 (-) True G294143
TU333571 lncRNA downstream 58510 72225057 ~ 72225299 (-) True G294126
TU333541 lncRNA downstream 111327 72172079 ~ 72172482 (-) True G294099
TU333539 lncRNA downstream 113776 72169702 ~ 72170033 (-) True G294097
TU333691 lncRNA upstream 26092 72310101 ~ 72310991 (-) True G294217
TU333706 lncRNA upstream 60186 72344195 ~ 72344445 (-) True G294232
TU333731 lncRNA upstream 103981 72387990 ~ 72388223 (-) True G294248
TU333739 lncRNA upstream 108497 72392506 ~ 72392841 (-) True G294256
TU333742 lncRNA upstream 111279 72395288 ~ 72395636 (-) True G294259
XM_036975090.1 mRNA downstream 17159 72264378 ~ 72266650 (-) True LOC110520529
XM_036975087.1 mRNA downstream 76991 72121974 ~ 72206818 (-) False LOC110504660
XM_036975086.1 mRNA downstream 76991 72121975 ~ 72206818 (-) False LOC110504660
XM_036975088.1 mRNA downstream 76991 72121975 ~ 72206818 (-) False LOC110504660
XM_036975089.1 mRNA downstream 76991 72121975 ~ 72206818 (-) False LOC110504660
XM_036975092.1 mRNA upstream 206839 72490848 ~ 72542128 (-) False LOC110520531
XM_036975091.1 mRNA upstream 209428 72493437 ~ 72537370 (-) False LOC110520531
LOC110504707 mRNA upstream 492707 72776716 ~ 72782874 (-) True LOC110504707
XM_036975102.1 mRNA upstream 507295 72791304 ~ 72825267 (-) False LOC110504714
XM_036975103.1 mRNA upstream 507295 72791304 ~ 72826819 (-) False LOC110504714
TU333434 other downstream 77011 72173049 ~ 72206798 (-) True LOC110504660
TU333405 other downstream 379901 71903314 ~ 71903908 (-) True G293984
TU332200 other downstream 1243657 71027619 ~ 71040152 (-) True G292919
TU332000 other downstream 1563218 70720036 ~ 70720591 (-) True G292753
TU331092 other downstream 2175859 70107540 ~ 70107950 (-) True G291977
TU333986 other upstream 287240 72571249 ~ 72575432 (-) True G294451
TU334284 other upstream 491398 72775407 ~ 72776607 (-) True G294697
TU334351 other upstream 592330 72876339 ~ 72880854 (-) True LOC110520539
TU335813 other upstream 1288283 73572292 ~ 73572911 (-) True G296011
TU335855 other upstream 1348029 73632038 ~ 73633036 (-) False G296043

Expression Profile