RNA id: TU333706



Basic Information


Item Value
RNA id TU333706
length 251
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G294232
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72344195 ~ 72344445 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgtagactactttatcactgacctcaacccagagtctctcagagcgttcacagtcagcccactgacacccctaccagaccacagcaaaatcacagtctacttaaacagagcaatactcaatcacgaggcatcaaagccaaaggaactgaataatattaagaaatgctatagatggaaagagtagtgtggaaacctaccaagaaacaattaggcaacaacaaattaaatCCCCTTTAGATagcttcctggac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU333691 lncRNA downstream 33204 72310101 ~ 72310991 (-) True G294217
TU333683 lncRNA downstream 60186 72283809 ~ 72284009 (-) True G294209
TU333672 lncRNA downstream 72489 72250813 ~ 72271706 (-) True G294198
TU333588 lncRNA downstream 100686 72238098 ~ 72243509 (-) True G294143
TU333571 lncRNA downstream 118896 72225057 ~ 72225299 (-) True G294126
TU333731 lncRNA upstream 43545 72387990 ~ 72388223 (-) True G294248
TU333739 lncRNA upstream 48061 72392506 ~ 72392841 (-) True G294256
TU333742 lncRNA upstream 50843 72395288 ~ 72395636 (-) True G294259
TU333750 lncRNA upstream 58364 72402809 ~ 72403136 (-) True G294267
TU333751 lncRNA upstream 60222 72404667 ~ 72404949 (-) True G294268
XM_036975090.1 mRNA downstream 77545 72264378 ~ 72266650 (-) True LOC110520529
XM_036975087.1 mRNA downstream 137377 72121974 ~ 72206818 (-) False LOC110504660
XM_036975092.1 mRNA upstream 146403 72490848 ~ 72542128 (-) False LOC110520531
XM_036975091.1 mRNA upstream 148992 72493437 ~ 72537370 (-) False LOC110520531
LOC110504707 mRNA upstream 432271 72776716 ~ 72782874 (-) True LOC110504707
XM_036975102.1 mRNA upstream 446859 72791304 ~ 72825267 (-) False LOC110504714
XM_036975103.1 mRNA upstream 446859 72791304 ~ 72826819 (-) False LOC110504714
TU333434 other downstream 137397 72173049 ~ 72206798 (-) True LOC110504660
TU333405 other downstream 440287 71903314 ~ 71903908 (-) True G293984
TU332200 other downstream 1304043 71027619 ~ 71040152 (-) True G292919
TU332000 other downstream 1623604 70720036 ~ 70720591 (-) True G292753
TU331092 other downstream 2236245 70107540 ~ 70107950 (-) True G291977
TU333986 other upstream 226804 72571249 ~ 72575432 (-) True G294451
TU334284 other upstream 430962 72775407 ~ 72776607 (-) True G294697
TU334351 other upstream 531894 72876339 ~ 72880854 (-) True LOC110520539
TU335813 other upstream 1227847 73572292 ~ 73572911 (-) True G296011
TU335855 other upstream 1287593 73632038 ~ 73633036 (-) False G296043

Expression Profile