RNA id: TU334303



Basic Information


Item Value
RNA id TU334303
length 284
lncRNA type read_through
GC content 0.40
exon number 2
gene id G294714
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72818606 ~ 72819652 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTGAACTAACCATAATGTAACTATAACACTCTACATCATGTTGACCTAACCATAACGTAACCATAACGCTCTAGACCATGTTGACCTAACCATATCGCTCTACATCATGTGGACCTAACCATAACTCTCCACACCATGTTGACCTAACCATTACGTAACCATAACTCTCTACAACATGTTGACCTAACCATAACGTAACCATAACGCTCCACAACATGTTGACCTAACCATAACTCTCCACACCATGTTGACCTAACCATAACACTCTACATCATGTTGACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU334278 lncRNA downstream 18749 72764953 ~ 72799857 (-) True G294691
TU334228 lncRNA downstream 122583 72695469 ~ 72696023 (-) True G294648
TU334224 lncRNA downstream 128096 72690187 ~ 72690510 (-) True G294644
TU334219 lncRNA downstream 130639 72686975 ~ 72687967 (-) True G294642
TU334200 lncRNA downstream 155363 72661725 ~ 72663243 (-) True G294626
TU334304 lncRNA upstream 874 72820526 ~ 72821310 (-) True G294715
TU334311 lncRNA upstream 11130 72830782 ~ 72831306 (-) True G294720
TU334349 lncRNA upstream 51241 72870893 ~ 72871890 (-) False LOC110520539
TU334372 lncRNA upstream 65377 72885029 ~ 72887639 (-) True G294760
TU334374 lncRNA upstream 72685 72892337 ~ 72892537 (-) True G294762
LOC110504707 mRNA downstream 35732 72776716 ~ 72782874 (-) True LOC110504707
XM_036975092.1 mRNA downstream 276478 72490848 ~ 72542128 (-) False LOC110520531
XM_036975091.1 mRNA downstream 281236 72493437 ~ 72537370 (-) False LOC110520531
XM_036975090.1 mRNA downstream 551956 72264378 ~ 72266650 (-) True LOC110520529
XM_036975086.1 mRNA downstream 611788 72121975 ~ 72206818 (-) False LOC110504660
XM_036975108.1 mRNA upstream 51200 72870852 ~ 72881264 (-) False LOC110520539
XM_036975111.1 mRNA upstream 205636 73025288 ~ 73034616 (-) False fhl2a
XM_036975112.1 mRNA upstream 205636 73025288 ~ 73039384 (-) True fhl2a
XM_036975115.1 mRNA upstream 342864 73162516 ~ 73266610 (-) True uxs1
XM_036975116.1 mRNA upstream 518518 73338170 ~ 73490996 (-) False st6gal2a
TU334284 other downstream 41999 72775407 ~ 72776607 (-) True G294697
TU333986 other downstream 243174 72571249 ~ 72575432 (-) True G294451
TU333434 other downstream 611808 72173049 ~ 72206798 (-) True LOC110504660
TU333405 other downstream 914698 71903314 ~ 71903908 (-) True G293984
TU332200 other downstream 1778454 71027619 ~ 71040152 (-) True G292919
TU334351 other upstream 56687 72876339 ~ 72880854 (-) True LOC110520539
TU335813 other upstream 752640 73572292 ~ 73572911 (-) True G296011
TU335855 other upstream 812386 73632038 ~ 73633036 (-) False G296043
TU335849 other upstream 812652 73632304 ~ 73633036 (-) True G296043
TU335926 other upstream 953502 73773154 ~ 73775299 (-) False G296102

Expression Profile