RNA id: TU334305



Basic Information


Item Value
RNA id TU334305
length 330
lncRNA type intronic
GC content 0.41
exon number 2
gene id G294715
representative False

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72819132 ~ 72821310 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTACACCACACTGACCTAACCATAACGCTCTACACTATGTTTACCTAACCATTACGTAACCATAACGCTCTACAACATGTTGACCTAACCATAACGTAACCATAACTCTCTACACCATGTTGACCTAACCATTACGTAACCATAACGCTCTACATCATGTTGACCTAACCATAACGTAACCATAACTCTCCACACCATGTTGACCTAACCATAACACTCTACACCATGTTGACCTAACCATAACGCTCTACACCATATTGACCTAACCATAACGTAACCATAACGCTCTACACCATGTTGACCTAACCATTACGTAACCATAACGCTCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU334278 lncRNA downstream 19275 72764953 ~ 72799857 (-) True G294691
TU334228 lncRNA downstream 123109 72695469 ~ 72696023 (-) True G294648
TU334224 lncRNA downstream 128622 72690187 ~ 72690510 (-) True G294644
TU334219 lncRNA downstream 131165 72686975 ~ 72687967 (-) True G294642
TU334200 lncRNA downstream 155889 72661725 ~ 72663243 (-) True G294626
TU334311 lncRNA upstream 9472 72830782 ~ 72831306 (-) True G294720
TU334349 lncRNA upstream 49583 72870893 ~ 72871890 (-) False LOC110520539
TU334372 lncRNA upstream 63719 72885029 ~ 72887639 (-) True G294760
TU334374 lncRNA upstream 71027 72892337 ~ 72892537 (-) True G294762
TU334375 lncRNA upstream 71708 72893018 ~ 72893271 (-) True G294763
LOC110504707 mRNA downstream 36258 72776716 ~ 72782874 (-) True LOC110504707
XM_036975092.1 mRNA downstream 277004 72490848 ~ 72542128 (-) False LOC110520531
XM_036975091.1 mRNA downstream 281762 72493437 ~ 72537370 (-) False LOC110520531
XM_036975090.1 mRNA downstream 552482 72264378 ~ 72266650 (-) True LOC110520529
XM_036975089.1 mRNA downstream 612314 72121975 ~ 72206818 (-) False LOC110504660
XM_036975108.1 mRNA upstream 49542 72870852 ~ 72881264 (-) False LOC110520539
XM_036975111.1 mRNA upstream 203978 73025288 ~ 73034616 (-) False fhl2a
XM_036975112.1 mRNA upstream 203978 73025288 ~ 73039384 (-) True fhl2a
XM_036975115.1 mRNA upstream 341206 73162516 ~ 73266610 (-) True uxs1
XM_036975116.1 mRNA upstream 516860 73338170 ~ 73490996 (-) False st6gal2a
TU334284 other downstream 42525 72775407 ~ 72776607 (-) True G294697
TU333986 other downstream 243700 72571249 ~ 72575432 (-) True G294451
TU333434 other downstream 612334 72173049 ~ 72206798 (-) True LOC110504660
TU333405 other downstream 915224 71903314 ~ 71903908 (-) True G293984
TU332200 other downstream 1778980 71027619 ~ 71040152 (-) True G292919
TU334351 other upstream 55029 72876339 ~ 72880854 (-) True LOC110520539
TU335813 other upstream 750982 73572292 ~ 73572911 (-) True G296011
TU335855 other upstream 810728 73632038 ~ 73633036 (-) False G296043
TU335849 other upstream 810994 73632304 ~ 73633036 (-) True G296043
TU335926 other upstream 951844 73773154 ~ 73775299 (-) False G296102

Expression Profile