RNA id: TU336013



Basic Information


Item Value
RNA id TU336013
length 471
RNA type TUCP
GC content 0.56
exon number 6
gene id G296166
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73877719 ~ 73880371 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCTTCATTTGCTTTGCCACCTTGGGTTTGGGTGCTGCCTTGGCAGGGGCCTTAGCACCAGCGGCAGAGGGCTTCTTGGTTGTCTGCTTTGCCTTCTTGGCCTCCTTGGCAGCTCTGATGGCCTGCTCACGCTGGGCCTTGCGGACCTCAGGCTTCTGGTTCCTCTTGGCCATGATCTCGGCCAGGGAGGCGCCGGTGATGGCCCTCTGGAACTTCACAGCACGACGTGTGCGCTTCTTTGTCACCTCTTCAGATTGGCCCTTCTTGTGTTTGCGCCTGTACAGCACAGTCCAGTTGATCTGTCTGGGGTTCCTTTTAGCCAGGAAGGCAGACTCACACTTAGCATTCAGGaactggaaaacCTTTCCGTCTATCCTGGCGTATCGGACGCCATGGCCGGGGTATATTTTATACCCGCTGAAACTGCACAGCTCGACCTTCATGATGGCTGAGGAGGACACAAAACCGGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU336012 lncRNA downstream 4763 73872734 ~ 73872956 (-) True G296165
TU336011 lncRNA downstream 5149 73872225 ~ 73872570 (-) True G296164
TU336009 lncRNA downstream 6240 73870510 ~ 73871479 (-) False LOC110520572
TU335982 lncRNA downstream 31741 73845287 ~ 73845978 (-) True G296141
TU335970 lncRNA downstream 53055 73824192 ~ 73824664 (-) True G296129
TU336050 lncRNA upstream 48490 73928861 ~ 73929759 (-) True G296193
TU335989 lncRNA upstream 67700 73948071 ~ 73949708 (-) True G296144
TU335990 lncRNA upstream 69554 73949925 ~ 73950171 (-) True G296145
TU335998 lncRNA upstream 70136 73950507 ~ 73951555 (-) False G296152
TU335999 lncRNA upstream 70655 73951026 ~ 73952102 (-) True G296152
XM_021597958.2 mRNA downstream 143 73870489 ~ 73877576 (-) False LOC110520572
XM_021597959.2 mRNA downstream 335 73870489 ~ 73877384 (-) False LOC110520572
XM_021597957.2 mRNA downstream 9344 73852084 ~ 73868375 (-) True LOC110520571
XM_021597956.2 mRNA downstream 9749 73852084 ~ 73867970 (-) False LOC110520571
XM_036975153.1 mRNA downstream 117985 73739671 ~ 73759734 (-) True zgc:92313
XM_021597963.2 mRNA upstream 3170 73883541 ~ 73889222 (-) True LOC110520575
XR_005051379.1 mRNA upstream 80045 73960416 ~ 73973401 (-) False LOC110520576
XR_005051378.1 mRNA upstream 83232 73963603 ~ 73973401 (-) False LOC110520576
XR_005051411.1 mRNA upstream 93081 73973452 ~ 73973615 (-) True LOC118964355
LOC118964353 mRNA upstream 93959 73974330 ~ 73974439 (-) True LOC118964353
TU336010 other downstream 3902 73872973 ~ 73873817 (-) True LOC110520572
TU335922 other downstream 68123 73808482 ~ 73809596 (-) True G296100
TU335926 other downstream 102420 73773154 ~ 73775299 (-) False G296102
TU335928 other downstream 102420 73773154 ~ 73775299 (-) True G296102
TU335855 other downstream 244683 73632038 ~ 73633036 (-) False G296043
TU336000 other upstream 90111 73970482 ~ 73971830 (-) True LOC110520576
TU336182 other upstream 358816 74239187 ~ 74239795 (-) True G296315
TU338161 other upstream 2080176 75960547 ~ 75963074 (-) True G298065
TU338234 other upstream 2174750 76055121 ~ 76057006 (-) True G298131
TU338309 other upstream 2285632 76166003 ~ 76166401 (-) True G298192

Expression Profile