RNA id: TCONS_00029534



Basic Information


Item Value
RNA id TCONS_00029534
length 310
RNA type mRNA
GC content 0.48
exon number 3
gene id XLOC_014985
representative True

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 41290713 ~ 41371990 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTAATGATAAAGAGGGCCGATCCAGCAGAGCTCAAGTTCATTTTCTTAAAGTATGCCAGTGTGGAGAAGAATGGAGAGCGCTACATGTCCCCAGAGGACTTTGTCTTCAAATTTCTCCATGCGCAAACAGACATTTGGCTTTCCAAGGATTCCGCCGTTCTACTGACAGGTGTTTTGGACCAAACCAAAGATGGGTTGATCTCCTTCCAGGAGTTTCTGGCTTTTGAGTCGGTGCTGTGCGCTCCGGATGCTCTCTTCATGGTCGCCTTCCAGCTCTTTGACAAAACTGGAAATGGCATTGCCACCTTTG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000166063

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00030331 lncRNA downstream 367514 40943904 ~ 40985308 (-) True XLOC_014981
TCONS_00030328 lncRNA downstream 367569 40909775 ~ 40985253 (-) False XLOC_014981
TCONS_00030332 lncRNA upstream 73616 41445594 ~ 41468958 (-) False XLOC_014987
TCONS_00029539 lncRNA upstream 73616 41445594 ~ 41468979 (-) True XLOC_014987
TCONS_00030333 lncRNA upstream 121799 41493777 ~ 41506484 (-) True XLOC_014989
TCONS_00030334 lncRNA upstream 140764 41512742 ~ 41513258 (-) True XLOC_014990
TCONS_00030335 lncRNA upstream 351509 41723487 ~ 41730021 (-) False XLOC_014992
TCONS_00029532 mRNA downstream 139104 41190258 ~ 41213718 (-) True XLOC_014984
TCONS_00029531 mRNA downstream 152878 41190258 ~ 41199944 (-) False XLOC_014984
TCONS_00029530 mRNA downstream 283121 41039028 ~ 41069701 (-) True XLOC_014983
TCONS_00029528 mRNA downstream 283249 41038668 ~ 41069573 (-) False XLOC_014983
TCONS_00029536 mRNA upstream 29155 41401133 ~ 41405187 (-) False XLOC_014986
TCONS_00029537 mRNA upstream 30094 41402072 ~ 41405315 (-) False XLOC_014986
TCONS_00029538 mRNA upstream 31777 41403755 ~ 41404870 (-) True XLOC_014986
TCONS_00029540 mRNA upstream 98238 41470216 ~ 41472228 (-) True XLOC_014988
TCONS_00029541 mRNA upstream 143781 41515759 ~ 41518951 (-) False XLOC_014991
TCONS_00029522 other downstream 571551 40781168 ~ 40781271 (-) True XLOC_014978
TCONS_00029518 other downstream 716131 40636572 ~ 40636691 (-) True XLOC_014976
TCONS_00029512 other downstream 1166559 40182734 ~ 40186263 (-) True XLOC_014972
TCONS_00029505 other downstream 2149087 39203618 ~ 39203735 (-) True XLOC_014966
TCONS_00029497 other downstream 2888409 38464295 ~ 38464413 (-) True XLOC_014962
TCONS_00029546 other upstream 801136 42173114 ~ 42173228 (-) True XLOC_014994
TCONS_00029578 other upstream 1223290 42595268 ~ 42595384 (-) True XLOC_015011
TCONS_00029580 other upstream 1306386 42678364 ~ 42678480 (-) True XLOC_015013
TCONS_00029587 other upstream 1657404 43029382 ~ 43030888 (-) True XLOC_015020
TCONS_00029605 other upstream 2677669 44049647 ~ 44062549 (-) False XLOC_015032

Expression Profile


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