RNA id: TCONS_00029546


Basic Information

Item Value
RNA id TCONS_00029546
length 115
RNA type rRNA
GC content 0.57
exon number 1
gene id XLOC_014994
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 42173114 ~ 42173228 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccggcagctagctctctgcaactctcacagggtcgcccactgaagctaagcagggctgggcCCGTTCAGTatctggataggagaccacatgggaaagctaggttgctgtcagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000186671

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00029545 lncRNA downstream 127840 42006531 ~ 42045274 (-) True XLOC_014993
TCONS_00030336 lncRNA downstream 442135 41723487 ~ 41730979 (-) True XLOC_014992
TCONS_00030335 lncRNA downstream 443093 41723487 ~ 41730021 (-) False XLOC_014992
TCONS_00030334 lncRNA downstream 659856 41512742 ~ 41513258 (-) True XLOC_014990
TCONS_00030333 lncRNA downstream 666630 41493777 ~ 41506484 (-) True XLOC_014989
TCONS_00029556 lncRNA upstream 232193 42405421 ~ 42413481 (-) True XLOC_015000
TCONS_00029797 lncRNA upstream 345349 42518577 ~ 42524909 (-) True XLOC_015004
TCONS_00029561 lncRNA upstream 375425 42548653 ~ 42551299 (-) True XLOC_015005
TCONS_00029567 lncRNA upstream 381193 42554421 ~ 42555109 (-) True XLOC_015006
TCONS_00029570 lncRNA upstream 387614 42560842 ~ 42566545 (-) True XLOC_015007
TCONS_00029544 mRNA downstream 127742 41841183 ~ 42045372 (-) False XLOC_014993
TCONS_00029543 mRNA downstream 182010 41841147 ~ 41991104 (-) False XLOC_014993
TCONS_00029541 mRNA downstream 654163 41515759 ~ 41518951 (-) False XLOC_014991
TCONS_00029542 mRNA downstream 654192 41516202 ~ 41518922 (-) True XLOC_014991
TCONS_00029540 mRNA downstream 700886 41470216 ~ 41472228 (-) True XLOC_014988
TCONS_00029547 mRNA upstream 41706 42214934 ~ 42249597 (-) True XLOC_014995
TCONS_00029548 mRNA upstream 62511 42235739 ~ 42238440 (-) False XLOC_014996
TCONS_00029549 mRNA upstream 62516 42235744 ~ 42238003 (-) True XLOC_014996
TCONS_00029550 mRNA upstream 68302 42241530 ~ 42244358 (-) True XLOC_014997
TCONS_00029551 mRNA upstream 89845 42263073 ~ 42291355 (-) False XLOC_014998
TCONS_00029535 other downstream 801136 41352822 ~ 41371978 (-) False XLOC_014985
TCONS_00029522 other downstream 1391843 40781168 ~ 40781271 (-) True XLOC_014978
TCONS_00029518 other downstream 1536423 40636572 ~ 40636691 (-) True XLOC_014976
TCONS_00029512 other downstream 1986851 40182734 ~ 40186263 (-) True XLOC_014972
TCONS_00029505 other downstream 2969379 39203618 ~ 39203735 (-) True XLOC_014966
TCONS_00029578 other upstream 422040 42595268 ~ 42595384 (-) True XLOC_015011
TCONS_00029580 other upstream 505136 42678364 ~ 42678480 (-) True XLOC_015013
TCONS_00029587 other upstream 856154 43029382 ~ 43030888 (-) True XLOC_015020
TCONS_00029605 other upstream 1876419 44049647 ~ 44062549 (-) False XLOC_015032
TCONS_00029608 other upstream 1885764 44058992 ~ 44062532 (-) False XLOC_015032