Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU339558 |
| length | 284 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G299328 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 77036846 ~ 77037957 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU339546 | lncRNA | downstream | 14722 | 77021728 ~ 77022124 (-) | True | G299319 |
| TU339517 | lncRNA | downstream | 48021 | 76988368 ~ 76988825 (-) | True | G299292 |
| TU339516 | lncRNA | downstream | 48531 | 76987862 ~ 76988315 (-) | True | G299291 |
| TU339514 | lncRNA | downstream | 52761 | 76983315 ~ 76984085 (-) | True | G299289 |
| TU339511 | lncRNA | downstream | 61522 | 76975071 ~ 76975324 (-) | True | G299286 |
| TU339605 | lncRNA | upstream | 94699 | 77132656 ~ 77133062 (-) | True | G299373 |
| TU339534 | lncRNA | upstream | 112035 | 77149992 ~ 77151643 (-) | True | LOC110520613 |
| TU339628 | lncRNA | upstream | 136777 | 77174734 ~ 77177524 (-) | False | LOC110520616 |
| TU339622 | lncRNA | upstream | 137405 | 77175362 ~ 77177524 (-) | False | LOC110520616 |
| TU339633 | lncRNA | upstream | 137405 | 77175362 ~ 77177524 (-) | True | LOC110520616 |
| LOC110520607 | mRNA | downstream | 154337 | 76881490 ~ 76882509 (-) | True | LOC110520607 |
| XM_021598002.2 | mRNA | downstream | 167846 | 76866230 ~ 76869000 (-) | True | LOC110520605 |
| XM_036975231.1 | mRNA | downstream | 179383 | 76520204 ~ 76857463 (-) | True | LOC110520604 |
| XR_005039942.1 | mRNA | downstream | 865727 | 76160117 ~ 76171119 (-) | True | LOC118944635 |
| XR_005051383.1 | mRNA | downstream | 918693 | 76102837 ~ 76118153 (-) | True | LOC110520602 |
| XM_021598009.2 | mRNA | upstream | 40781 | 77078738 ~ 77082644 (-) | False | LOC110520611 |
| XM_021598010.2 | mRNA | upstream | 40781 | 77078738 ~ 77082651 (-) | True | LOC110520611 |
| XM_036975238.1 | mRNA | upstream | 46296 | 77084253 ~ 77102682 (-) | False | LOC110504825 |
| XM_036975239.1 | mRNA | upstream | 46296 | 77084253 ~ 77102686 (-) | False | LOC110504825 |
| XM_036975240.1 | mRNA | upstream | 46296 | 77084253 ~ 77102688 (-) | True | LOC110504825 |
| TU339219 | other | downstream | 249115 | 76782843 ~ 76787731 (-) | True | G299024 |
| TU338309 | other | downstream | 870445 | 76166003 ~ 76166401 (-) | True | G298192 |
| TU338234 | other | downstream | 979840 | 76055121 ~ 76057006 (-) | True | G298131 |
| TU338161 | other | downstream | 1073772 | 75960547 ~ 75963074 (-) | True | G298065 |
| TU336182 | other | downstream | 2797051 | 74239187 ~ 74239795 (-) | True | G296315 |
| TU340463 | other | upstream | 798525 | 77836482 ~ 77839215 (-) | True | pknox1.1 |
| TU340453 | other | upstream | 806710 | 77844667 ~ 77850766 (-) | False | LOC110520626 |
| TU340455 | other | upstream | 806710 | 77844667 ~ 77850766 (-) | True | LOC110520626 |
| TU340551 | other | upstream | 890529 | 77928486 ~ 77983204 (-) | True | G300200 |
| TU340609 | other | upstream | 996528 | 78034485 ~ 78035018 (-) | True | G300251 |
