Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU339690 |
| length | 342 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G299445 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 77274301 ~ 77274642 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU339628 | lncRNA | downstream | 96777 | 77174734 ~ 77177524 (-) | False | LOC110520616 |
| TU339622 | lncRNA | downstream | 96777 | 77175362 ~ 77177524 (-) | False | LOC110520616 |
| TU339633 | lncRNA | downstream | 96777 | 77175362 ~ 77177524 (-) | True | LOC110520616 |
| TU339534 | lncRNA | downstream | 122658 | 77149992 ~ 77151643 (-) | True | LOC110520613 |
| TU339605 | lncRNA | downstream | 141239 | 77132656 ~ 77133062 (-) | True | G299373 |
| TU339691 | lncRNA | upstream | 58 | 77274700 ~ 77274906 (-) | True | G299446 |
| TU339952 | lncRNA | upstream | 168357 | 77442999 ~ 77446805 (-) | False | G299676 |
| TU339953 | lncRNA | upstream | 170062 | 77444704 ~ 77446805 (-) | True | G299676 |
| TU339969 | lncRNA | upstream | 194439 | 77469081 ~ 77474433 (-) | True | G299690 |
| TU339971 | lncRNA | upstream | 195145 | 77469787 ~ 77470144 (-) | True | G299691 |
| XM_036975241.1 | mRNA | downstream | 28881 | 77175082 ~ 77245420 (-) | False | LOC110520616 |
| XR_005051385.1 | mRNA | downstream | 28881 | 77175082 ~ 77245420 (-) | False | LOC110520616 |
| XM_021598013.2 | mRNA | downstream | 101064 | 77164642 ~ 77173237 (-) | True | tlr7 |
| XM_021598012.2 | mRNA | downstream | 109855 | 77152248 ~ 77164446 (-) | True | LOC110520614 |
| XR_002473013.2 | mRNA | downstream | 122422 | 77149891 ~ 77151879 (-) | False | LOC110520613 |
| XM_036975248.1 | mRNA | upstream | 251828 | 77526470 ~ 77538361 (-) | True | LOC110520620 |
| LOC118944720 | mRNA | upstream | 292714 | 77567356 ~ 77569192 (-) | True | LOC118944720 |
| XM_021598023.2 | mRNA | upstream | 298517 | 77573159 ~ 77577004 (-) | True | LOC110520621 |
| XM_036975251.1 | mRNA | upstream | 557805 | 77832447 ~ 77843970 (-) | False | pknox1.1 |
| XM_036975253.1 | mRNA | upstream | 557805 | 77832447 ~ 77843970 (-) | False | pknox1.1 |
| TU339219 | other | downstream | 486570 | 76782843 ~ 76787731 (-) | True | G299024 |
| TU338309 | other | downstream | 1107900 | 76166003 ~ 76166401 (-) | True | G298192 |
| TU338234 | other | downstream | 1217295 | 76055121 ~ 76057006 (-) | True | G298131 |
| TU338161 | other | downstream | 1311227 | 75960547 ~ 75963074 (-) | True | G298065 |
| TU336182 | other | downstream | 3034506 | 74239187 ~ 74239795 (-) | True | G296315 |
| TU340463 | other | upstream | 561840 | 77836482 ~ 77839215 (-) | True | pknox1.1 |
| TU340453 | other | upstream | 570025 | 77844667 ~ 77850766 (-) | False | LOC110520626 |
| TU340455 | other | upstream | 570025 | 77844667 ~ 77850766 (-) | True | LOC110520626 |
| TU340551 | other | upstream | 653844 | 77928486 ~ 77983204 (-) | True | G300200 |
| TU340609 | other | upstream | 759843 | 78034485 ~ 78035018 (-) | True | G300251 |
