Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU340591 |
| length | 473 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G300237 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 78014172 ~ 78014644 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU340582 | lncRNA | downstream | 15462 | 77997677 ~ 77998710 (-) | True | G300230 |
| TU340565 | lncRNA | downstream | 47449 | 77966452 ~ 77966723 (-) | True | G300213 |
| TU340540 | lncRNA | downstream | 102321 | 77905812 ~ 77911851 (-) | True | G300190 |
| TU340528 | lncRNA | downstream | 134094 | 77879119 ~ 77880078 (-) | False | G300179 |
| TU340529 | lncRNA | downstream | 134414 | 77879119 ~ 77879758 (-) | True | G300179 |
| TU340783 | lncRNA | upstream | 79437 | 78094081 ~ 78094333 (-) | True | G300398 |
| TU340788 | lncRNA | upstream | 87207 | 78101851 ~ 78124289 (-) | True | G300402 |
| TU340816 | lncRNA | upstream | 164958 | 78179602 ~ 78180445 (-) | True | G300430 |
| TU340822 | lncRNA | upstream | 172778 | 78187422 ~ 78187992 (-) | True | G300434 |
| TU340839 | lncRNA | upstream | 240848 | 78255492 ~ 78255818 (-) | True | G300451 |
| XM_036975283.1 | mRNA | downstream | 50106 | 77935312 ~ 77964066 (-) | True | LOC110520630 |
| XM_036975284.1 | mRNA | downstream | 50108 | 77934076 ~ 77964064 (-) | False | LOC110520630 |
| XM_036975267.1 | mRNA | downstream | 80845 | 77873788 ~ 77933327 (-) | True | LOC110520629 |
| XM_036975268.1 | mRNA | downstream | 81152 | 77873788 ~ 77933020 (-) | False | LOC110520629 |
| XM_036975271.1 | mRNA | downstream | 81312 | 77873788 ~ 77932860 (-) | False | LOC110520629 |
| XM_021598044.2 | mRNA | upstream | 57947 | 78072591 ~ 78076780 (-) | True | LOC110520634 |
| XM_021598045.2 | mRNA | upstream | 70056 | 78084700 ~ 78096638 (-) | False | ifngr2a |
| XM_021598047.2 | mRNA | upstream | 70056 | 78084700 ~ 78096638 (-) | False | ifngr2a |
| XM_021598049.2 | mRNA | upstream | 70056 | 78084700 ~ 78096638 (-) | False | ifngr2a |
| NM_001361111.1 | mRNA | upstream | 70061 | 78084705 ~ 78096610 (-) | True | ifngr2a |
| TU340551 | other | downstream | 30968 | 77928486 ~ 77983204 (-) | True | G300200 |
| TU340453 | other | downstream | 163406 | 77844667 ~ 77850766 (-) | False | LOC110520626 |
| TU340455 | other | downstream | 163406 | 77844667 ~ 77850766 (-) | True | LOC110520626 |
| TU340463 | other | downstream | 174957 | 77836482 ~ 77839215 (-) | True | pknox1.1 |
| TU339219 | other | downstream | 1226441 | 76782843 ~ 76787731 (-) | True | G299024 |
| TU340609 | other | upstream | 19841 | 78034485 ~ 78035018 (-) | True | G300251 |
| TU340859 | other | upstream | 279139 | 78293783 ~ 78294220 (-) | True | G300470 |
| TU341782 | other | upstream | 1088705 | 79103349 ~ 79107772 (-) | False | G301283 |
| TU341784 | other | upstream | 1088705 | 79103349 ~ 79290938 (-) | True | G301283 |
| TU341779 | other | upstream | 1207454 | 79222098 ~ 79223310 (-) | True | G301282 |
