Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU340839 |
| length | 327 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G300451 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 78255492 ~ 78255818 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU340822 | lncRNA | downstream | 67500 | 78187422 ~ 78187992 (-) | True | G300434 |
| TU340816 | lncRNA | downstream | 75047 | 78179602 ~ 78180445 (-) | True | G300430 |
| TU340788 | lncRNA | downstream | 131203 | 78101851 ~ 78124289 (-) | True | G300402 |
| TU340783 | lncRNA | downstream | 161159 | 78094081 ~ 78094333 (-) | True | G300398 |
| TU340591 | lncRNA | downstream | 240848 | 78014172 ~ 78014644 (-) | True | G300237 |
| TU340867 | lncRNA | upstream | 52601 | 78308419 ~ 78308685 (-) | True | G300478 |
| TU340868 | lncRNA | upstream | 53707 | 78309525 ~ 78309808 (-) | True | G300479 |
| TU340871 | lncRNA | upstream | 60791 | 78316609 ~ 78316836 (-) | True | G300482 |
| TU340874 | lncRNA | upstream | 69427 | 78325245 ~ 78325569 (-) | True | G300484 |
| TU340879 | lncRNA | upstream | 79763 | 78335581 ~ 78336060 (-) | True | G300489 |
| XM_036975290.1 | mRNA | downstream | 14308 | 78235039 ~ 78241184 (-) | False | LOC110520639 |
| XM_036975292.1 | mRNA | downstream | 14308 | 78235039 ~ 78241184 (-) | False | LOC110520639 |
| XR_005051386.1 | mRNA | downstream | 14308 | 78235039 ~ 78241184 (-) | False | LOC110520639 |
| XR_005051387.1 | mRNA | downstream | 14308 | 78235039 ~ 78241184 (-) | False | LOC110520639 |
| XR_005051388.1 | mRNA | downstream | 14308 | 78235039 ~ 78241184 (-) | True | LOC110520639 |
| XM_036975312.1 | mRNA | upstream | 1716811 | 79972629 ~ 79987627 (-) | False | LOC110505446 |
| XM_036975302.1 | mRNA | upstream | 1752067 | 80007885 ~ 80248467 (-) | True | LOC110504879 |
| XR_005051392.1 | mRNA | upstream | 2052601 | 80308419 ~ 80335869 (-) | False | LOC110520643 |
| XM_036975303.1 | mRNA | upstream | 2052603 | 80308421 ~ 80335869 (-) | True | LOC110520643 |
| XM_036975322.1 | mRNA | upstream | 2161131 | 80416949 ~ 80421159 (-) | False | LOC110520645 |
| TU340609 | other | downstream | 220474 | 78034485 ~ 78035018 (-) | True | G300251 |
| TU340551 | other | downstream | 272288 | 77928486 ~ 77983204 (-) | True | G300200 |
| TU340453 | other | downstream | 404726 | 77844667 ~ 77850766 (-) | False | LOC110520626 |
| TU340455 | other | downstream | 404726 | 77844667 ~ 77850766 (-) | True | LOC110520626 |
| TU340463 | other | downstream | 416277 | 77836482 ~ 77839215 (-) | True | pknox1.1 |
| TU340859 | other | upstream | 37965 | 78293783 ~ 78294220 (-) | True | G300470 |
| TU341782 | other | upstream | 847531 | 79103349 ~ 79107772 (-) | False | G301283 |
| TU341784 | other | upstream | 847531 | 79103349 ~ 79290938 (-) | True | G301283 |
| TU341779 | other | upstream | 966280 | 79222098 ~ 79223310 (-) | True | G301282 |
| TU341970 | other | upstream | 1194270 | 79450088 ~ 79450472 (-) | True | G301452 |
