Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00029560 |
| length | 1313 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | XLOC_015005 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 42547699 ~ 42551338 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-051030-105 | Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver. |
| ensembl_id | ENSDART00000162837 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029797 | lncRNA | downstream | 22790 | 42518577 ~ 42524909 (-) | True | XLOC_015004 |
| TCONS_00029556 | lncRNA | downstream | 134218 | 42405421 ~ 42413481 (-) | True | XLOC_015000 |
| TCONS_00029545 | lncRNA | downstream | 502425 | 42006531 ~ 42045274 (-) | True | XLOC_014993 |
| TCONS_00030336 | lncRNA | downstream | 816720 | 41723487 ~ 41730979 (-) | True | XLOC_014992 |
| TCONS_00030335 | lncRNA | downstream | 817678 | 41723487 ~ 41730021 (-) | False | XLOC_014992 |
| TCONS_00029567 | lncRNA | upstream | 3083 | 42554421 ~ 42555109 (-) | True | XLOC_015006 |
| TCONS_00029570 | lncRNA | upstream | 9504 | 42560842 ~ 42566545 (-) | True | XLOC_015007 |
| TCONS_00029577 | lncRNA | upstream | 40862 | 42592200 ~ 42597817 (-) | True | XLOC_015010 |
| TCONS_00030337 | lncRNA | upstream | 134568 | 42685906 ~ 42688192 (-) | True | XLOC_015014 |
| TCONS_00029581 | lncRNA | upstream | 291771 | 42843109 ~ 42844172 (-) | False | XLOC_015015 |
| TCONS_00029559 | mRNA | downstream | 44556 | 42490936 ~ 42503143 (-) | True | XLOC_015003 |
| TCONS_00029558 | mRNA | downstream | 85208 | 42456922 ~ 42462491 (-) | True | XLOC_015002 |
| TCONS_00029557 | mRNA | downstream | 123100 | 42418227 ~ 42424599 (-) | True | XLOC_015001 |
| TCONS_00029555 | mRNA | downstream | 131003 | 42397287 ~ 42416696 (-) | False | XLOC_015000 |
| TCONS_00029554 | mRNA | downstream | 156309 | 42367293 ~ 42391390 (-) | True | XLOC_014999 |
| TCONS_00029562 | mRNA | upstream | 1691 | 42553029 ~ 42557556 (-) | False | XLOC_015006 |
| TCONS_00029563 | mRNA | upstream | 1807 | 42553145 ~ 42557486 (-) | False | XLOC_015006 |
| TCONS_00029564 | mRNA | upstream | 1837 | 42553175 ~ 42556086 (-) | False | XLOC_015006 |
| TCONS_00029565 | mRNA | upstream | 1837 | 42553175 ~ 42557416 (-) | False | XLOC_015006 |
| TCONS_00029566 | mRNA | upstream | 3008 | 42554346 ~ 42557475 (-) | False | XLOC_015006 |
| TCONS_00029546 | other | downstream | 374471 | 42173114 ~ 42173228 (-) | True | XLOC_014994 |
| TCONS_00029535 | other | downstream | 1175721 | 41352822 ~ 41371978 (-) | False | XLOC_014985 |
| TCONS_00029522 | other | downstream | 1766428 | 40781168 ~ 40781271 (-) | True | XLOC_014978 |
| TCONS_00029518 | other | downstream | 1911008 | 40636572 ~ 40636691 (-) | True | XLOC_014976 |
| TCONS_00029512 | other | downstream | 2361436 | 40182734 ~ 40186263 (-) | True | XLOC_014972 |
| TCONS_00029578 | other | upstream | 43930 | 42595268 ~ 42595384 (-) | True | XLOC_015011 |
| TCONS_00029580 | other | upstream | 127026 | 42678364 ~ 42678480 (-) | True | XLOC_015013 |
| TCONS_00029587 | other | upstream | 478044 | 43029382 ~ 43030888 (-) | True | XLOC_015020 |
| TCONS_00029605 | other | upstream | 1498309 | 44049647 ~ 44062549 (-) | False | XLOC_015032 |
| TCONS_00029608 | other | upstream | 1507654 | 44058992 ~ 44062532 (-) | False | XLOC_015032 |
