Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00029569 |
| length | 863 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | XLOC_015007 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 42559143 ~ 42566559 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0005764 | lysosome | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060503-344 | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in cellular protein catabolic process. Predicted to be active in extracellular space and lysosome. |
| ensembl_id | ENSDART00000142135 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029567 | lncRNA | downstream | 4657 | 42554421 ~ 42555109 (-) | True | XLOC_015006 |
| TCONS_00029561 | lncRNA | downstream | 8467 | 42548653 ~ 42551299 (-) | True | XLOC_015005 |
| TCONS_00029797 | lncRNA | downstream | 34857 | 42518577 ~ 42524909 (-) | True | XLOC_015004 |
| TCONS_00029556 | lncRNA | downstream | 146285 | 42405421 ~ 42413481 (-) | True | XLOC_015000 |
| TCONS_00029545 | lncRNA | downstream | 514492 | 42006531 ~ 42045274 (-) | True | XLOC_014993 |
| TCONS_00029577 | lncRNA | upstream | 25641 | 42592200 ~ 42597817 (-) | True | XLOC_015010 |
| TCONS_00030337 | lncRNA | upstream | 119347 | 42685906 ~ 42688192 (-) | True | XLOC_015014 |
| TCONS_00029581 | lncRNA | upstream | 276550 | 42843109 ~ 42844172 (-) | False | XLOC_015015 |
| TCONS_00030338 | lncRNA | upstream | 276550 | 42843109 ~ 42845206 (-) | True | XLOC_015015 |
| TCONS_00029583 | lncRNA | upstream | 354610 | 42921169 ~ 42924745 (-) | True | XLOC_015016 |
| TCONS_00029562 | mRNA | downstream | 2210 | 42553029 ~ 42557556 (-) | False | XLOC_015006 |
| TCONS_00029563 | mRNA | downstream | 2280 | 42553145 ~ 42557486 (-) | False | XLOC_015006 |
| TCONS_00029566 | mRNA | downstream | 2291 | 42554346 ~ 42557475 (-) | False | XLOC_015006 |
| TCONS_00029565 | mRNA | downstream | 2350 | 42553175 ~ 42557416 (-) | False | XLOC_015006 |
| TCONS_00029564 | mRNA | downstream | 3680 | 42553175 ~ 42556086 (-) | False | XLOC_015006 |
| TCONS_00029571 | mRNA | upstream | 980 | 42567539 ~ 42573297 (-) | False | XLOC_015008 |
| TCONS_00029572 | mRNA | upstream | 982 | 42567541 ~ 42573219 (-) | False | XLOC_015008 |
| TCONS_00029573 | mRNA | upstream | 1598 | 42568157 ~ 42571829 (-) | False | XLOC_015008 |
| TCONS_00029574 | mRNA | upstream | 2951 | 42569510 ~ 42573220 (-) | True | XLOC_015008 |
| TCONS_00029575 | mRNA | upstream | 7165 | 42573724 ~ 42588510 (-) | True | XLOC_015009 |
| TCONS_00029546 | other | downstream | 386538 | 42173114 ~ 42173228 (-) | True | XLOC_014994 |
| TCONS_00029535 | other | downstream | 1187788 | 41352822 ~ 41371978 (-) | False | XLOC_014985 |
| TCONS_00029522 | other | downstream | 1778495 | 40781168 ~ 40781271 (-) | True | XLOC_014978 |
| TCONS_00029518 | other | downstream | 1923075 | 40636572 ~ 40636691 (-) | True | XLOC_014976 |
| TCONS_00029512 | other | downstream | 2373503 | 40182734 ~ 40186263 (-) | True | XLOC_014972 |
| TCONS_00029578 | other | upstream | 28709 | 42595268 ~ 42595384 (-) | True | XLOC_015011 |
| TCONS_00029580 | other | upstream | 111805 | 42678364 ~ 42678480 (-) | True | XLOC_015013 |
| TCONS_00029587 | other | upstream | 462823 | 43029382 ~ 43030888 (-) | True | XLOC_015020 |
| TCONS_00029605 | other | upstream | 1483088 | 44049647 ~ 44062549 (-) | False | XLOC_015032 |
| TCONS_00029608 | other | upstream | 1492433 | 44058992 ~ 44062532 (-) | False | XLOC_015032 |
