RNA id: TU342692


Basic Information

Item Value
RNA id TU342692
length 1466
RNA type TUCP
GC content 0.40
exon number 3
gene id G302117
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 80049621 ~ 80051285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTATTCTTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTAATTTAATCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCTTCTCCACAGTATTACTCTCCACAGTAATCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCTTCTCCACAGTATTACTCTCCACAGTAATCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACATTATTAATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACATTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATATATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTACTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCTTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATTTATTCCTCTCCACAGTATTCCTCTCAACAGTATTCATGTATCCTCTCCACAGTATGCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCTTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCTTCTCCACAGTATATATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCATAGTAGTCCTGTATTCCTCTCCACAGTATTCATGTATTCCTCTCGACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATATATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCGACAGTATTCATGTAATCCTCTCCACAGTATTAATGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCCTCTCCACAGTATTCATGTATTCCTCTCCACAGTATTCAAGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU342676 lncRNA downstream 29665 80019330 ~ 80019956 (-) True G302101
TU342653 lncRNA downstream 44903 80003568 ~ 80004718 (-) True G302085
TU342668 lncRNA downstream 47336 80002061 ~ 80002285 (-) True G302097
TU342657 lncRNA downstream 65582 79973789 ~ 79984039 (-) True LOC110505446
TU342656 lncRNA downstream 76692 79971886 ~ 79972929 (-) False LOC110505446
TU342717 lncRNA upstream 47476 80098761 ~ 80184066 (-) True G302138
TU342736 lncRNA upstream 82682 80133967 ~ 80134321 (-) True G302153
TU342764 lncRNA upstream 131218 80182503 ~ 80183390 (-) True G302178
TU342778 lncRNA upstream 151536 80202821 ~ 80203357 (-) True G302189
TU342825 lncRNA upstream 239222 80290507 ~ 80290741 (-) True G302231
XM_036975312.1 mRNA downstream 61994 79972629 ~ 79987627 (-) False LOC110505446
XM_036975290.1 mRNA downstream 1808437 78235039 ~ 78241184 (-) False LOC110520639
XR_005051392.1 mRNA upstream 257134 80308419 ~ 80335869 (-) False LOC110520643
XM_036975303.1 mRNA upstream 257136 80308421 ~ 80335869 (-) True LOC110520643
XM_036975322.1 mRNA upstream 365664 80416949 ~ 80421159 (-) False LOC110520645
XM_021598066.2 mRNA upstream 365664 80416949 ~ 80421217 (-) False LOC110520645
XR_005051394.1 mRNA upstream 365664 80416949 ~ 80421217 (-) False LOC110520645
TU342471 other downstream 105187 79944051 ~ 79944434 (-) True G301928
TU341971 other downstream 598651 79450708 ~ 79450970 (-) True G301453
TU341970 other downstream 599149 79450088 ~ 79450472 (-) True G301452
TU341784 other downstream 758683 79103349 ~ 79290938 (-) True G301283
TU341779 other downstream 826311 79222098 ~ 79223310 (-) True G301282
TU343001 other upstream 368065 80419350 ~ 80421145 (-) True LOC110520645
TU343054 other upstream 456650 80507935 ~ 80508297 (-) True G302399
TU343413 other upstream 629701 80680986 ~ 80683186 (-) True G302660
TU343484 other upstream 669432 80720717 ~ 80721681 (-) True G302724
TU343486 other upstream 670453 80721738 ~ 80722623 (-) True G302725

Expression Profile