Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU343449 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 1 |
| gene id | G302690 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 80630177 ~ 80630387 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU343423 | lncRNA | downstream | 67637 | 80562331 ~ 80562540 (-) | True | G302670 |
| TU343071 | lncRNA | downstream | 104668 | 80525029 ~ 80525509 (-) | True | olig1 |
| TU343055 | lncRNA | downstream | 121620 | 80508338 ~ 80508557 (-) | True | G302400 |
| TU343050 | lncRNA | downstream | 137098 | 80492864 ~ 80493079 (-) | True | G302395 |
| TU343049 | lncRNA | downstream | 137670 | 80492307 ~ 80492507 (-) | True | G302394 |
| TU343453 | lncRNA | upstream | 3841 | 80634228 ~ 80634473 (-) | True | G302694 |
| TU343416 | lncRNA | upstream | 5843 | 80636230 ~ 80637754 (-) | True | G302663 |
| TU343411 | lncRNA | upstream | 48211 | 80678598 ~ 80680866 (-) | True | G302658 |
| TU343412 | lncRNA | upstream | 54342 | 80684729 ~ 80688496 (-) | True | G302659 |
| TU343465 | lncRNA | upstream | 58739 | 80689126 ~ 80689338 (-) | True | G302706 |
| XM_021598070.2 | mRNA | downstream | 76910 | 80551048 ~ 80553267 (-) | True | LOC110520649 |
| XM_021598069.2 | mRNA | downstream | 104648 | 80524093 ~ 80525529 (-) | False | olig1 |
| XM_021598068.2 | mRNA | downstream | 197195 | 80428791 ~ 80432982 (-) | True | LOC110520647 |
| XM_036975321.1 | mRNA | downstream | 208956 | 80416949 ~ 80421221 (-) | False | LOC110520645 |
| XR_005051394.1 | mRNA | downstream | 208960 | 80416949 ~ 80421217 (-) | False | LOC110520645 |
| XM_036975307.1 | mRNA | upstream | 15610 | 80645997 ~ 80658655 (-) | False | hpxa |
| XM_036975308.1 | mRNA | upstream | 15610 | 80645997 ~ 80658660 (-) | True | hpxa |
| XM_036975300.1 | mRNA | upstream | 166608 | 80796995 ~ 80873810 (-) | False | LOC110518808 |
| XM_036975299.1 | mRNA | upstream | 166608 | 80796995 ~ 80874124 (-) | False | LOC110518808 |
| XR_005051391.1 | mRNA | upstream | 166608 | 80796995 ~ 80874124 (-) | False | LOC110518808 |
| TU343054 | other | downstream | 121880 | 80507935 ~ 80508297 (-) | True | G302399 |
| TU343001 | other | downstream | 209032 | 80419350 ~ 80421145 (-) | True | LOC110520645 |
| TU342692 | other | downstream | 578892 | 80049621 ~ 80051285 (-) | True | G302117 |
| TU342471 | other | downstream | 685743 | 79944051 ~ 79944434 (-) | True | G301928 |
| TU341971 | other | downstream | 1179207 | 79450708 ~ 79450970 (-) | True | G301453 |
| TU343413 | other | upstream | 50599 | 80680986 ~ 80683186 (-) | True | G302660 |
| TU343484 | other | upstream | 90330 | 80720717 ~ 80721681 (-) | True | G302724 |
| TU343486 | other | upstream | 91351 | 80721738 ~ 80722623 (-) | True | G302725 |
| TU344665 | other | upstream | 1391001 | 82021388 ~ 82022265 (-) | True | G303663 |
| TU344667 | other | upstream | 1392442 | 82022829 ~ 82023451 (-) | True | G303665 |
