Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU343547 |
| length | 790 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G302771 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 80834394 ~ 80835906 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU343538 | lncRNA | downstream | 15691 | 80817772 ~ 80818703 (-) | True | G302765 |
| TU343531 | lncRNA | downstream | 27504 | 80806168 ~ 80806890 (-) | True | G302761 |
| TU343428 | lncRNA | downstream | 39896 | 80792257 ~ 80794498 (-) | False | G302673 |
| TU343427 | lncRNA | downstream | 40132 | 80792257 ~ 80794262 (-) | False | G302673 |
| TU343429 | lncRNA | downstream | 40132 | 80792257 ~ 80794262 (-) | True | G302673 |
| TU343557 | lncRNA | upstream | 14250 | 80850156 ~ 80850752 (-) | False | G302777 |
| TU343555 | lncRNA | upstream | 14375 | 80850281 ~ 80850752 (-) | True | G302777 |
| TU343598 | lncRNA | upstream | 104556 | 80940462 ~ 81037215 (-) | True | G302811 |
| TU343614 | lncRNA | upstream | 128449 | 80964355 ~ 80965230 (-) | True | G302826 |
| TU343643 | lncRNA | upstream | 167045 | 81002951 ~ 81003318 (-) | True | G302848 |
| XM_036975308.1 | mRNA | downstream | 175734 | 80645997 ~ 80658660 (-) | True | hpxa |
| XM_036975307.1 | mRNA | downstream | 175739 | 80645997 ~ 80658655 (-) | False | hpxa |
| XM_021598070.2 | mRNA | downstream | 281127 | 80551048 ~ 80553267 (-) | True | LOC110520649 |
| XM_021598069.2 | mRNA | downstream | 308865 | 80524093 ~ 80525529 (-) | False | olig1 |
| XM_021598068.2 | mRNA | downstream | 401412 | 80428791 ~ 80432982 (-) | True | LOC110520647 |
| XM_036975310.1 | mRNA | upstream | 69134 | 80905040 ~ 80908349 (-) | True | LOC110520653 |
| XM_036975309.1 | mRNA | upstream | 143232 | 80979138 ~ 80984383 (-) | True | LOC110520654 |
| XM_036975305.1 | mRNA | upstream | 176192 | 81012098 ~ 81038367 (-) | False | LOC110520656 |
| XM_036975306.1 | mRNA | upstream | 176192 | 81012098 ~ 81038367 (-) | True | LOC110520656 |
| XM_021598650.2 | mRNA | upstream | 1040715 | 81876621 ~ 81887719 (-) | True | si:dkey-69o16.5 |
| TU343486 | other | downstream | 111771 | 80721738 ~ 80722623 (-) | True | G302725 |
| TU343484 | other | downstream | 112713 | 80720717 ~ 80721681 (-) | True | G302724 |
| TU343413 | other | downstream | 151208 | 80680986 ~ 80683186 (-) | True | G302660 |
| TU343054 | other | downstream | 326097 | 80507935 ~ 80508297 (-) | True | G302399 |
| TU343001 | other | downstream | 413249 | 80419350 ~ 80421145 (-) | True | LOC110520645 |
| TU344665 | other | upstream | 1185482 | 82021388 ~ 82022265 (-) | True | G303663 |
| TU344667 | other | upstream | 1186923 | 82022829 ~ 82023451 (-) | True | G303665 |
| TU344968 | other | upstream | 1461850 | 82297756 ~ 82314081 (-) | True | pard3bb |
| TU345254 | other | upstream | 1909338 | 82745244 ~ 82747738 (-) | True | LOC110505453 |
| TU345368 | other | upstream | 1995464 | 82831370 ~ 82851751 (-) | False | G304204 |
