RNA id: TU345571



Basic Information


Item Value
RNA id TU345571
length 269
lncRNA type intronic
GC content 0.53
exon number 2
gene id G304366
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83052714 ~ 83053592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tcagagtcagctaaggatcagatcagagtcagctacagcccagatcagagtcagcaACAGCCCAGATCCGAGTCggctacagcccagatcagagtcagctacagcccagatcagttacagcccagatcagatcagagtcagctacagcccagatcagttacagcccagatcagagtcagctacagcccagatcagagtcagctacagcccagatcagagtcaactacagcccagatcagagtcagctacagcccagatcagttacagcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU345559 lncRNA downstream 10597 83024277 ~ 83042117 (-) True G304356
TU345548 lncRNA downstream 54427 82982413 ~ 82998287 (-) True LOC110504940
TU345454 lncRNA downstream 79902 82972485 ~ 82972812 (-) True G304271
TU345439 lncRNA downstream 128836 82923643 ~ 82923878 (-) True G304257
TU345433 lncRNA downstream 142815 82909520 ~ 82909899 (-) True G304251
TU345573 lncRNA upstream 4955 83058547 ~ 83061785 (-) True G304368
TU345618 lncRNA upstream 113953 83167545 ~ 83171995 (-) True G304412
TU345639 lncRNA upstream 142117 83195709 ~ 83196015 (-) True G304426
TU345642 lncRNA upstream 146508 83200100 ~ 83220989 (-) True G304429
TU345694 lncRNA upstream 229275 83282867 ~ 83283273 (-) True G304465
XM_021584685.2 mRNA downstream 304980 82744854 ~ 82747734 (-) False LOC110505453
XM_036975335.1 mRNA downstream 466632 82297732 ~ 82586082 (-) False pard3bb
XM_036975345.1 mRNA upstream 429861 83483453 ~ 83539175 (-) False ttll4
XM_036975348.1 mRNA upstream 429861 83483453 ~ 83539354 (-) False ttll4
XM_036975344.1 mRNA upstream 429861 83483453 ~ 83539355 (-) False ttll4
XM_036975346.1 mRNA upstream 429861 83483453 ~ 83539355 (-) False ttll4
XM_036975347.1 mRNA upstream 429861 83483453 ~ 83539355 (-) False ttll4
TU345446 other downstream 101358 82950069 ~ 82951356 (-) True G304264
TU345368 other downstream 200963 82831370 ~ 82851751 (-) False G304204
TU345254 other downstream 304976 82745244 ~ 82747738 (-) True LOC110505453
TU344968 other downstream 738633 82297756 ~ 82314081 (-) True pard3bb
TU344667 other downstream 1029263 82022829 ~ 82023451 (-) True G303665
TU346425 other upstream 902152 83955744 ~ 83986517 (-) True abi2a
TU346535 other upstream 1026429 84080021 ~ 84080484 (-) True LOC110504983
TU346587 other upstream 1127459 84181051 ~ 84182035 (-) True G305189
TU346768 other upstream 1227891 84281483 ~ 84300976 (-) True si:dkey-230p4.1
TU346797 other upstream 1251712 84305304 ~ 84308414 (-) True LOC110520676

Expression Profile