RNA id: TU345696



Basic Information


Item Value
RNA id TU345696
length 218
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G304467
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83283721 ~ 83283938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttcagaggcaaggagactagtcaggatcgagggaaagatgaacggaacaaagtacagagagatccttcatgaacACCGGCTCGAGagagctcaggatctcagactggggcgaaggttcaccttccaacaggacaacgaccctaagaacacagccgggacaacgcaggagtggcttcgggaaaagtctctgaatgtccttgagtggcccagccagagcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU345694 lncRNA downstream 448 83282867 ~ 83283273 (-) True G304465
TU345642 lncRNA downstream 62732 83200100 ~ 83220989 (-) True G304429
TU345639 lncRNA downstream 87706 83195709 ~ 83196015 (-) True G304426
TU345618 lncRNA downstream 111726 83167545 ~ 83171995 (-) True G304412
TU345573 lncRNA downstream 221936 83058547 ~ 83061785 (-) True G304368
TU345697 lncRNA upstream 186 83284124 ~ 83284577 (-) True G304468
TU345690 lncRNA upstream 23199 83307137 ~ 83311214 (-) False G304463
TU345689 lncRNA upstream 24627 83308565 ~ 83311214 (-) True G304463
TU345687 lncRNA upstream 27411 83311349 ~ 83312788 (-) True G304461
TU345752 lncRNA upstream 84828 83368766 ~ 83368980 (-) True G304516
XM_036965260.1 mRNA downstream 90015 82905486 ~ 83193706 (-) False LOC110504940
XM_021584685.2 mRNA downstream 535987 82744854 ~ 82747734 (-) False LOC110505453
XM_036975336.1 mRNA downstream 697639 82297732 ~ 82586082 (-) False pard3bb
XM_036975345.1 mRNA upstream 199515 83483453 ~ 83539175 (-) False ttll4
XM_036975348.1 mRNA upstream 199515 83483453 ~ 83539354 (-) False ttll4
XM_036975344.1 mRNA upstream 199515 83483453 ~ 83539355 (-) False ttll4
XM_036975346.1 mRNA upstream 199515 83483453 ~ 83539355 (-) False ttll4
XM_036975347.1 mRNA upstream 199515 83483453 ~ 83539355 (-) False ttll4
TU345446 other downstream 332365 82950069 ~ 82951356 (-) True G304264
TU345368 other downstream 431970 82831370 ~ 82851751 (-) False G304204
TU345254 other downstream 535983 82745244 ~ 82747738 (-) True LOC110505453
TU344968 other downstream 969640 82297756 ~ 82314081 (-) True pard3bb
TU344667 other downstream 1260270 82022829 ~ 82023451 (-) True G303665
TU346425 other upstream 671806 83955744 ~ 83986517 (-) True abi2a
TU346535 other upstream 796083 84080021 ~ 84080484 (-) True LOC110504983
TU346587 other upstream 897113 84181051 ~ 84182035 (-) True G305189
TU346768 other upstream 997545 84281483 ~ 84300976 (-) True si:dkey-230p4.1
TU346797 other upstream 1021366 84305304 ~ 84308414 (-) True LOC110520676

Expression Profile