RNA id: TU346089



Basic Information


Item Value
RNA id TU346089
length 359
lncRNA type intronic
GC content 0.42
exon number 3
gene id G304791
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83734645 ~ 83750749 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atctctaacagaaccatactatcctagcctggtcccagatctaaaacacagccagactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccagactatcttagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccagactatcttagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtccatgatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccatac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346075 lncRNA downstream 2723 83695851 ~ 83731922 (-) True G304781
TU346048 lncRNA downstream 7390 83715500 ~ 83727255 (-) True G304758
TU346081 lncRNA downstream 12059 83703524 ~ 83722586 (-) True G304785
TU346043 lncRNA downstream 17542 83682035 ~ 83717103 (-) False G304756
TU346082 lncRNA downstream 19967 83713694 ~ 83714678 (-) True G304786
TU346227 lncRNA upstream 114339 83865088 ~ 83866045 (-) False G304896
TU346229 lncRNA upstream 114339 83865088 ~ 83866045 (-) False G304896
TU346228 lncRNA upstream 115001 83865750 ~ 83866045 (-) True G304896
TU346248 lncRNA upstream 142602 83893351 ~ 83898110 (-) True G304913
TU346260 lncRNA upstream 155880 83906629 ~ 83906828 (-) True G304924
XM_036975349.1 mRNA downstream 91278 83639090 ~ 83643367 (-) True LOC110505466
XM_021598087.2 mRNA downstream 105364 83626569 ~ 83629281 (-) True LOC110520669
XM_036965263.1 mRNA downstream 121766 83546922 ~ 83612879 (-) True abcb6b
XM_036975346.1 mRNA downstream 195290 83483453 ~ 83539355 (-) False ttll4
XM_036975354.1 mRNA upstream 165123 83915872 ~ 83986617 (-) False abi2a
XM_036975355.1 mRNA upstream 165123 83915872 ~ 83986617 (-) False abi2a
XM_036975356.1 mRNA upstream 165123 83915872 ~ 83986617 (-) False abi2a
XM_036975357.1 mRNA upstream 165123 83915872 ~ 83986617 (-) False abi2a
XM_036975358.1 mRNA upstream 165123 83915872 ~ 83986617 (-) False abi2a
TU345446 other downstream 783289 82950069 ~ 82951356 (-) True G304264
TU345368 other downstream 882894 82831370 ~ 82851751 (-) False G304204
TU345254 other downstream 986907 82745244 ~ 82747738 (-) True LOC110505453
TU344968 other downstream 1420564 82297756 ~ 82314081 (-) True pard3bb
TU344667 other downstream 1711194 82022829 ~ 82023451 (-) True G303665
TU346425 other upstream 204995 83955744 ~ 83986517 (-) True abi2a
TU346535 other upstream 329272 84080021 ~ 84080484 (-) True LOC110504983
TU346587 other upstream 430302 84181051 ~ 84182035 (-) True G305189
TU346768 other upstream 530734 84281483 ~ 84300976 (-) True si:dkey-230p4.1
TU346797 other upstream 554555 84305304 ~ 84308414 (-) True LOC110520676

Expression Profile