RNA id: TU346227



Basic Information


Item Value
RNA id TU346227
length 232
lncRNA type intronic
GC content 0.42
exon number 2
gene id G304896
representative False

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83865088 ~ 83866045 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctactactactgctgctactactaccgctactactactactactacttctactgctactactactactactgctgctactactaccgctactactactactgctactactactactgctactactactgctgctactactactgctgctactactactactactactgctactactactactgctactactactactgctactactgctactactactactactactgctac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346089 lncRNA downstream 114339 83734645 ~ 83750749 (-) True G304791
TU346077 lncRNA downstream 125104 83696995 ~ 83739984 (-) True G304782
TU346075 lncRNA downstream 133166 83695851 ~ 83731922 (-) True G304781
TU346048 lncRNA downstream 137833 83715500 ~ 83727255 (-) True G304758
TU346081 lncRNA downstream 142502 83703524 ~ 83722586 (-) True G304785
TU346248 lncRNA upstream 27306 83893351 ~ 83898110 (-) True G304913
TU346260 lncRNA upstream 40584 83906629 ~ 83906828 (-) True G304924
TU346426 lncRNA upstream 54058 83920103 ~ 83920305 (-) True G305058
TU346427 lncRNA upstream 54450 83920495 ~ 83920735 (-) True G305059
TU346430 lncRNA upstream 59911 83925956 ~ 83926232 (-) True G305062
XM_036975350.1 mRNA downstream 94538 83647331 ~ 83770550 (-) False LOC118964336
XM_036975349.1 mRNA downstream 221721 83639090 ~ 83643367 (-) True LOC110505466
XM_021598087.2 mRNA downstream 235807 83626569 ~ 83629281 (-) True LOC110520669
XM_036965263.1 mRNA downstream 252209 83546922 ~ 83612879 (-) True abcb6b
XM_036975346.1 mRNA downstream 325733 83483453 ~ 83539355 (-) False ttll4
XM_036975354.1 mRNA upstream 49827 83915872 ~ 83986617 (-) False abi2a
XM_036975355.1 mRNA upstream 49827 83915872 ~ 83986617 (-) False abi2a
XM_036975356.1 mRNA upstream 49827 83915872 ~ 83986617 (-) False abi2a
XM_036975357.1 mRNA upstream 49827 83915872 ~ 83986617 (-) False abi2a
XM_036975358.1 mRNA upstream 49827 83915872 ~ 83986617 (-) False abi2a
TU345446 other downstream 913732 82950069 ~ 82951356 (-) True G304264
TU345368 other downstream 1013337 82831370 ~ 82851751 (-) False G304204
TU345254 other downstream 1117350 82745244 ~ 82747738 (-) True LOC110505453
TU344968 other downstream 1551007 82297756 ~ 82314081 (-) True pard3bb
TU344667 other downstream 1841637 82022829 ~ 82023451 (-) True G303665
TU346425 other upstream 89699 83955744 ~ 83986517 (-) True abi2a
TU346535 other upstream 213976 84080021 ~ 84080484 (-) True LOC110504983
TU346587 other upstream 315006 84181051 ~ 84182035 (-) True G305189
TU346768 other upstream 415438 84281483 ~ 84300976 (-) True si:dkey-230p4.1
TU346797 other upstream 439259 84305304 ~ 84308414 (-) True LOC110520676

Expression Profile