Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030345 |
| length | 2735 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 2 |
| gene id | XLOC_015035 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 45003801 ~ 45007057 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0050877 | nervous system process | biological_process |
| GO:0043010 | camera-type eye development | biological_process |
| GO:0007267 | cell-cell signaling | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0001505 | regulation of neurotransmitter levels | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0098916 | anterograde trans-synaptic signaling | biological_process |
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0048880 | sensory system development | biological_process |
| GO:0023061 | signal release | biological_process |
| GO:0099536 | synaptic signaling | biological_process |
| GO:0099537 | trans-synaptic signaling | biological_process |
| GO:0009449 | gamma-aminobutyric acid biosynthetic process | biological_process |
| GO:0003008 | system process | biological_process |
| GO:0001654 | eye development | biological_process |
| GO:0007423 | sensory organ development | biological_process |
| GO:0150063 | visual system development | biological_process |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0045202 | synapse | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| GO:0004351 | glutamate decarboxylase activity | molecular_function |
| GO:0015075 | ion transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030344 | lncRNA | downstream | 1102749 | 43897940 ~ 43901052 (-) | True | XLOC_015031 |
| TCONS_00029598 | lncRNA | downstream | 1255741 | 43740700 ~ 43748060 (-) | False | XLOC_015029 |
| TCONS_00030343 | lncRNA | downstream | 1292508 | 43704915 ~ 43711293 (-) | True | XLOC_015028 |
| TCONS_00030342 | lncRNA | downstream | 1461745 | 43508114 ~ 43542056 (-) | False | XLOC_015024 |
| TCONS_00029589 | lncRNA | downstream | 1479744 | 43429805 ~ 43524057 (-) | False | XLOC_015024 |
| TCONS_00029614 | lncRNA | upstream | 150445 | 45157502 ~ 45244708 (-) | False | XLOC_015036 |
| TCONS_00029615 | lncRNA | upstream | 237128 | 45244185 ~ 45244708 (-) | True | XLOC_015036 |
| TCONS_00029799 | lncRNA | upstream | 682180 | 45689237 ~ 45690415 (-) | True | XLOC_015038 |
| TCONS_00029619 | lncRNA | upstream | 935997 | 45943054 ~ 45960155 (-) | False | XLOC_015039 |
| TCONS_00029623 | lncRNA | upstream | 986839 | 45993896 ~ 45999223 (-) | True | XLOC_015041 |
| TCONS_00029613 | mRNA | downstream | 48091 | 44725691 ~ 44955710 (-) | True | XLOC_015034 |
| TCONS_00029612 | mRNA | downstream | 201883 | 44123618 ~ 44801918 (-) | False | XLOC_015034 |
| TCONS_00029610 | mRNA | downstream | 912396 | 44068250 ~ 44091405 (-) | False | XLOC_015033 |
| TCONS_00029611 | mRNA | downstream | 914292 | 44068414 ~ 44089509 (-) | True | XLOC_015033 |
| TCONS_00029607 | mRNA | downstream | 938220 | 44058557 ~ 44065581 (-) | False | XLOC_015032 |
| TCONS_00029616 | mRNA | upstream | 368612 | 45375669 ~ 45534392 (-) | False | XLOC_015037 |
| TCONS_00029617 | mRNA | upstream | 368612 | 45375669 ~ 45650994 (-) | True | XLOC_015037 |
| TCONS_00029618 | mRNA | upstream | 849114 | 45856171 ~ 45960191 (-) | False | XLOC_015039 |
| TCONS_00029621 | mRNA | upstream | 976590 | 45983647 ~ 45985989 (-) | True | XLOC_015040 |
| TCONS_00029622 | mRNA | upstream | 983997 | 45991054 ~ 46018152 (-) | False | XLOC_015041 |
| TCONS_00029605 | other | downstream | 941252 | 44049647 ~ 44062549 (-) | False | XLOC_015032 |
| TCONS_00029608 | other | downstream | 941269 | 44058992 ~ 44062532 (-) | False | XLOC_015032 |
| TCONS_00029587 | other | downstream | 1972913 | 43029382 ~ 43030888 (-) | True | XLOC_015020 |
| TCONS_00029580 | other | downstream | 2325321 | 42678364 ~ 42678480 (-) | True | XLOC_015013 |
| TCONS_00029578 | other | downstream | 2408417 | 42595268 ~ 42595384 (-) | True | XLOC_015011 |
| TCONS_00029620 | other | upstream | 948022 | 45955079 ~ 45960183 (-) | True | XLOC_015039 |
| TCONS_00029625 | other | upstream | 1012820 | 46019877 ~ 46022879 (-) | False | XLOC_015042 |
| TCONS_00029642 | other | upstream | 2393132 | 47400189 ~ 47400307 (-) | True | XLOC_015054 |
| TCONS_00029643 | other | upstream | 2408533 | 47415590 ~ 47416405 (-) | True | XLOC_015055 |
| TCONS_00029659 | other | upstream | 2560656 | 47567713 ~ 47567848 (-) | True | XLOC_015061 |
