RNA id: TU346484


Basic Information

Item Value
RNA id TU346484
length 656
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G305109
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 84013493 ~ 84014257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

accctaaccaccatactaccatactaccctaaccaccataccaccatactaccctaaccaccatactaccatactaccatattaccctaaccaccatactaccctaaccaccatactaccatactaccatactaccatactaccatattaccctaaccaccatactaccctaaccaccatactaccataactaccatactaccctaaccaccatactaccctaaccaccttactaccctaaccaccatactaccatactaccctaaccaccatactaccctaaccaccatactaccctaaccaccatactaccctaaccaccatactaccatactaccctaaccaccatactaccctaactACCATACTACCTTAACCACCATATCACcttactaccctaaccaccatactaccctaaccaccatactagcatactaccctaaccaccatactaccctaactACAATACCAACATACTACCCcaaccaccatactaccatactaccattctaccctaaccaccatactaccctaaccaccatactactatactaccctaaccaccatactaccatactaccctaaccaccatactaccctaaccaccatactaccctaaccgcCATAtcaccatactaccctaaccaccatactac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU346483 lncRNA downstream 320 84012645 ~ 84013173 (-) True G305108
TU346482 lncRNA downstream 1075 84012174 ~ 84012418 (-) True G305107
TU346481 lncRNA downstream 1455 84011832 ~ 84012038 (-) True G305106
TU346479 lncRNA downstream 4425 84008868 ~ 84009068 (-) True G305104
TU346478 lncRNA downstream 5381 84007844 ~ 84008112 (-) True G305103
TU346491 lncRNA upstream 11170 84025427 ~ 84025904 (-) True G305114
TU346515 lncRNA upstream 51856 84066113 ~ 84066664 (-) True G305130
TU346520 lncRNA upstream 55062 84069319 ~ 84069595 (-) True G305135
TU346521 lncRNA upstream 55349 84069606 ~ 84069836 (-) True G305136
TU346532 lncRNA upstream 58014 84072271 ~ 84072519 (-) True G305140
XM_036975355.1 mRNA downstream 26876 83915872 ~ 83986617 (-) False abi2a
XM_036975362.1 mRNA upstream 59681 84073938 ~ 84220262 (-) False LOC110504983
XM_036965273.1 mRNA upstream 218470 84232727 ~ 84301357 (-) False si:dkey-230p4.1
XM_021598092.2 mRNA upstream 291046 84305303 ~ 84308440 (-) False LOC110520676
XM_036975363.1 mRNA upstream 298458 84312715 ~ 84624269 (-) False LOC110516739
XR_005051402.1 mRNA upstream 298458 84312715 ~ 84624269 (-) False LOC110516739
TU346425 other downstream 26976 83955744 ~ 83986517 (-) True abi2a
TU345446 other downstream 1062137 82950069 ~ 82951356 (-) True G304264
TU345368 other downstream 1161742 82831370 ~ 82851751 (-) False G304204
TU345254 other downstream 1265755 82745244 ~ 82747738 (-) True LOC110505453
TU344968 other downstream 1699412 82297756 ~ 82314081 (-) True pard3bb
TU346535 other upstream 65764 84080021 ~ 84080484 (-) True LOC110504983
TU346587 other upstream 166794 84181051 ~ 84182035 (-) True G305189
TU346768 other upstream 267226 84281483 ~ 84300976 (-) True si:dkey-230p4.1
TU346797 other upstream 291047 84305304 ~ 84308414 (-) True LOC110520676
TU346793 other upstream 370018 84384275 ~ 84387134 (-) True LOC110516739

Expression Profile