Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021600236.2 |
| length | 1464 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 8 |
| gene id | LOC110522111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 12574316 ~ 12581049 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0015780 | nucleotide-sugar transmembrane transport | biological_process |
| GO:0034219 | carbohydrate transmembrane transport | biological_process |
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:1901679 | nucleotide transmembrane transport | biological_process |
| GO:0015711 | organic anion transport | biological_process |
| GO:0000139 | Golgi membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005338 | nucleotide-sugar transmembrane transporter activity | molecular_function |
| GO:0005351 | carbohydrate | molecular_function |
| id | description |
|---|---|
| K15272 | SLC35A1_2_3; solute carrier family 35 (UDP-sugar transporter), member A1/2/3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU363832 | lncRNA | upstream | 21480 | 12552601 ~ 12552836 (+) | True | G321055 |
| TU363831 | lncRNA | upstream | 21777 | 12552332 ~ 12552539 (+) | True | G321054 |
| TU363828 | lncRNA | upstream | 42684 | 12531393 ~ 12531632 (+) | True | G321051 |
| TU363822 | lncRNA | upstream | 50880 | 12523216 ~ 12523436 (+) | True | G321045 |
| TU363812 | lncRNA | upstream | 56491 | 12517600 ~ 12517825 (+) | True | G321039 |
| TU363985 | lncRNA | downstream | 193210 | 12774259 ~ 12775354 (+) | True | G321201 |
| TU364014 | lncRNA | downstream | 232552 | 12813601 ~ 12819677 (+) | True | G321227 |
| TU364017 | lncRNA | downstream | 233202 | 12814251 ~ 12818852 (+) | True | G321228 |
| TU364043 | lncRNA | downstream | 269223 | 12850272 ~ 12853113 (+) | True | G321254 |
| TU364045 | lncRNA | downstream | 272871 | 12853920 ~ 12854586 (+) | True | G321256 |
| LOC110522118 | mRNA | upstream | 9667 | 12560870 ~ 12564649 (+) | True | LOC110522118 |
| XM_021600242.2 | mRNA | upstream | 25197 | 12548411 ~ 12549119 (+) | False | LOC110522117 |
| XM_021600240.2 | mRNA | upstream | 38580 | 12520219 ~ 12535736 (+) | True | LOC110522116 |
| XM_021598415.2 | mRNA | upstream | 63649 | 12509342 ~ 12510667 (+) | False | LOC110520967 |
| XM_021600220.2 | mRNA | upstream | 140536 | 12422340 ~ 12433780 (+) | True | LOC110522100 |
| XM_021600238.2 | mRNA | downstream | 213855 | 12794904 ~ 12798111 (+) | True | pnrc1 |
| XM_021600232.2 | mRNA | downstream | 219729 | 12800778 ~ 12812377 (+) | False | LOC110522108 |
| XM_036975667.1 | mRNA | downstream | 347066 | 12928115 ~ 12981592 (+) | False | LOC110521046 |
| XM_036975666.1 | mRNA | downstream | 352133 | 12933182 ~ 12981592 (+) | False | LOC110521046 |
| XM_036975668.1 | mRNA | downstream | 375607 | 12956656 ~ 12981592 (+) | False | LOC110521046 |
| TU363815 | other | upstream | 25202 | 12548470 ~ 12549114 (+) | False | LOC110522117 |
| TU363816 | other | upstream | 25243 | 12548470 ~ 12549073 (+) | True | LOC110522117 |
| TU362050 | other | upstream | 1196560 | 11376227 ~ 11377756 (+) | True | LOC110522079 |
| TU359704 | other | upstream | 3110819 | 9459980 ~ 9463497 (+) | False | LOC118964431 |
| TU359694 | other | upstream | 3153987 | 9419418 ~ 9420329 (+) | True | G317265 |
| TU364001 | other | downstream | 219787 | 12800836 ~ 12812365 (+) | True | LOC110522108 |
| TU364003 | other | downstream | 399351 | 12980400 ~ 12981551 (+) | True | LOC110521046 |
| TU364241 | other | downstream | 561898 | 13142947 ~ 13143443 (+) | True | G321447 |
| TU365525 | other | downstream | 1269238 | 13850287 ~ 13885503 (+) | True | G322645 |
| TU368490 | other | downstream | 3854204 | 16435253 ~ 16436634 (+) | False | G325389 |
