Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU398214 |
| length | 548 |
| lncRNA type | sense_over |
| GC content | 0.52 |
| exon number | 1 |
| gene id | LOC110521109 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 40650654 ~ 40674839 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU398224 | lncRNA | upstream | 6087 | 40667919 ~ 40668205 (+) | True | G351836 |
| TU398221 | lncRNA | upstream | 8780 | 40665092 ~ 40665512 (+) | True | G351833 |
| TU398219 | lncRNA | upstream | 9663 | 40661322 ~ 40664629 (+) | True | G351831 |
| TU398205 | lncRNA | upstream | 38292 | 40635736 ~ 40636000 (+) | True | G351820 |
| TU398203 | lncRNA | upstream | 39729 | 40634004 ~ 40634563 (+) | True | G351819 |
| TU398211 | lncRNA | downstream | 2754 | 40677593 ~ 40678107 (+) | False | G351826 |
| TU398212 | lncRNA | downstream | 2837 | 40677676 ~ 40678170 (+) | False | G351826 |
| TU398213 | lncRNA | downstream | 2837 | 40677676 ~ 40678107 (+) | True | G351826 |
| TU398228 | lncRNA | downstream | 12507 | 40687346 ~ 40687985 (+) | True | G351840 |
| TU398231 | lncRNA | downstream | 15497 | 40690336 ~ 40691039 (+) | True | G351843 |
| XM_021598373.2 | mRNA | upstream | 43471 | 40626614 ~ 40630821 (+) | True | paqr8 |
| NM_001124651.1 | mRNA | upstream | 44608 | 40626393 ~ 40629684 (+) | False | paqr8 |
| XM_036976311.1 | mRNA | upstream | 76903 | 40579686 ~ 40597389 (+) | True | stmn4 |
| XM_036976288.1 | mRNA | upstream | 236484 | 40436551 ~ 40437808 (+) | True | LOC110522596 |
| XM_036976290.1 | mRNA | upstream | 241435 | 40431447 ~ 40432857 (+) | False | LOC110522596 |
| XM_021601088.2 | mRNA | downstream | 33823 | 40708662 ~ 40714024 (+) | False | LOC110522626 |
| XM_021601089.2 | mRNA | downstream | 34453 | 40709292 ~ 40714024 (+) | True | LOC110522626 |
| XM_036976317.1 | mRNA | downstream | 46687 | 40721526 ~ 40732294 (+) | False | si:ch211-63o20.7 |
| XM_036976319.1 | mRNA | downstream | 46687 | 40721526 ~ 40732344 (+) | False | si:ch211-63o20.7 |
| XM_036976318.1 | mRNA | downstream | 46687 | 40721526 ~ 40732351 (+) | False | si:ch211-63o20.7 |
| TU397710 | other | upstream | 537519 | 40134687 ~ 40136773 (+) | False | G351441 |
| TU397708 | other | upstream | 537519 | 40134966 ~ 40136773 (+) | True | G351441 |
| TU396863 | other | upstream | 1284818 | 39388589 ~ 39389474 (+) | True | G350665 |
| TU396861 | other | upstream | 1284857 | 39388141 ~ 39389435 (+) | False | G350665 |
| TU396290 | other | upstream | 1769518 | 38903730 ~ 38904774 (+) | True | G350211 |
| TU398718 | other | downstream | 315320 | 40990159 ~ 40990505 (+) | True | G352136 |
| TU398979 | other | downstream | 535408 | 41210247 ~ 41210998 (+) | True | G352340 |
| TU398983 | other | downstream | 536274 | 41211113 ~ 41213949 (+) | True | G352341 |
| TU399156 | other | downstream | 691362 | 41366201 ~ 41366607 (+) | True | G352477 |
| TU399921 | other | downstream | 1449837 | 42124676 ~ 42125759 (+) | True | G353125 |
