Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030543 |
| length | 520 |
| RNA type | processed_transcript |
| GC content | 0.41 |
| exon number | 2 |
| gene id | XLOC_015221 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 8031234 ~ 8050498 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-070705-25 | Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Orthologous to human PCOLCE2 (procollagen C-endopeptidase enhancer 2). |
| ensembl_id | ENSDART00000142345 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033474 | lncRNA | upstream | 277143 | 7763907 ~ 7768273 (+) | False | XLOC_015218 |
| TCONS_00033475 | lncRNA | upstream | 277143 | 7763911 ~ 7768273 (+) | True | XLOC_015218 |
| TCONS_00030530 | lncRNA | upstream | 322089 | 7715806 ~ 7723327 (+) | False | XLOC_015213 |
| TCONS_00033473 | lncRNA | upstream | 324703 | 7715792 ~ 7720713 (+) | False | XLOC_015213 |
| TCONS_00033237 | lncRNA | upstream | 383315 | 7657408 ~ 7662101 (+) | True | XLOC_015212 |
| TCONS_00033476 | lncRNA | downstream | 437137 | 8484394 ~ 8488138 (+) | False | XLOC_015225 |
| TCONS_00033238 | lncRNA | downstream | 437754 | 8485011 ~ 8488138 (+) | False | XLOC_015225 |
| TCONS_00033239 | lncRNA | downstream | 437783 | 8485040 ~ 8488138 (+) | False | XLOC_015225 |
| TCONS_00033477 | lncRNA | downstream | 438563 | 8485820 ~ 8488138 (+) | False | XLOC_015225 |
| TCONS_00033240 | lncRNA | downstream | 438574 | 8485831 ~ 8487964 (+) | True | XLOC_015225 |
| TCONS_00030540 | mRNA | upstream | 171032 | 7851493 ~ 7874384 (+) | True | XLOC_015220 |
| TCONS_00030538 | mRNA | upstream | 171341 | 7847480 ~ 7874075 (+) | False | XLOC_015220 |
| TCONS_00030539 | mRNA | upstream | 175803 | 7849890 ~ 7869613 (+) | False | XLOC_015220 |
| TCONS_00030537 | mRNA | upstream | 216016 | 7818368 ~ 7829400 (+) | True | XLOC_015219 |
| TCONS_00030531 | mRNA | upstream | 318168 | 7715810 ~ 7727248 (+) | False | XLOC_015213 |
| TCONS_00030544 | mRNA | downstream | 65192 | 8112449 ~ 8114608 (+) | True | XLOC_015222 |
| TCONS_00030546 | mRNA | downstream | 213852 | 8261109 ~ 8312199 (+) | True | XLOC_015224 |
| TCONS_00030547 | mRNA | downstream | 602036 | 8649293 ~ 8663104 (+) | False | XLOC_015226 |
| TCONS_00030548 | mRNA | downstream | 602099 | 8649356 ~ 8660204 (+) | True | XLOC_015226 |
| TCONS_00030549 | mRNA | downstream | 669898 | 8717155 ~ 8777496 (+) | False | XLOC_015228 |
| TCONS_00030536 | other | upstream | 321475 | 7723870 ~ 7723941 (+) | True | XLOC_015217 |
| TCONS_00030535 | other | upstream | 321833 | 7723394 ~ 7723583 (+) | True | XLOC_015216 |
| TCONS_00030534 | other | upstream | 324026 | 7721212 ~ 7721390 (+) | True | XLOC_015215 |
| TCONS_00030533 | other | upstream | 324407 | 7720939 ~ 7721009 (+) | True | XLOC_015214 |
| TCONS_00030532 | other | upstream | 324787 | 7720559 ~ 7720629 (+) | True | XLOC_015213 |
| TCONS_00030545 | other | downstream | 142028 | 8189285 ~ 8189400 (+) | True | XLOC_015223 |
| TCONS_00030568 | other | downstream | 1784081 | 9831338 ~ 9833806 (+) | False | XLOC_015238 |
| TCONS_00030569 | other | downstream | 1790775 | 9838032 ~ 9841864 (+) | False | XLOC_015238 |
| TCONS_00030571 | other | downstream | 1828272 | 9875529 ~ 9875645 (+) | True | XLOC_015239 |
| TCONS_00030577 | other | downstream | 1926624 | 9973881 ~ 9982953 (+) | True | XLOC_015242 |
