Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU372200 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G328796 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 18768038 ~ 18768249 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
18,767,200
18,767,600
18,768,000
18,768,400
18,768,800
18,769,200
18,769,200
18,769,600
18,770,000
18,770,400
18,770,800
18,771,200
NC_048568.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU372197 | lncRNA | downstream | 6487 | 18761274 ~ 18761551 (-) | True | G328793 |
| TU372196 | lncRNA | downstream | 8201 | 18759264 ~ 18759837 (-) | True | G328792 |
| TU372181 | lncRNA | downstream | 28101 | 18739656 ~ 18739937 (-) | True | G328777 |
| TU372168 | lncRNA | downstream | 48788 | 18718960 ~ 18719250 (-) | True | G328764 |
| TU371748 | lncRNA | downstream | 84612 | 18683131 ~ 18683426 (-) | True | G328399 |
| TU372212 | lncRNA | upstream | 12556 | 18780805 ~ 18781037 (-) | True | G328808 |
| TU372163 | lncRNA | upstream | 24210 | 18792459 ~ 18796350 (-) | True | G328761 |
| TU372147 | lncRNA | upstream | 26773 | 18795022 ~ 18799253 (-) | False | G328760 |
| TU372150 | lncRNA | upstream | 29957 | 18798206 ~ 18859914 (-) | True | G328760 |
| TU372302 | lncRNA | upstream | 148674 | 18916923 ~ 18921923 (-) | True | G328893 |
| XM_021600464.2 | mRNA | downstream | 217457 | 18547787 ~ 18550581 (-) | True | LOC110522239 |
| XM_021600463.2 | mRNA | downstream | 222432 | 18523675 ~ 18545606 (-) | True | LOC110522238 |
| XM_036975802.1 | mRNA | downstream | 222433 | 18523675 ~ 18545605 (-) | False | LOC110522238 |
| XM_036975801.1 | mRNA | downstream | 223335 | 18523675 ~ 18544703 (-) | False | LOC110522238 |
| XM_021600457.2 | mRNA | downstream | 270801 | 18473614 ~ 18497237 (-) | True | LOC110522236 |
| XM_021600465.2 | mRNA | upstream | 33043 | 18801292 ~ 18812642 (-) | True | LOC110522240 |
| XM_021598423.2 | mRNA | upstream | 196141 | 18964390 ~ 18978387 (-) | True | LOC110520976 |
| XM_036975819.1 | mRNA | upstream | 251742 | 19019991 ~ 19088860 (-) | False | LOC110522245 |
| XM_036975818.1 | mRNA | upstream | 251742 | 19019991 ~ 19110681 (-) | False | LOC110522245 |
| XM_036975817.1 | mRNA | upstream | 251742 | 19019991 ~ 19119788 (-) | True | LOC110522245 |
| TU371579 | other | downstream | 321008 | 18446583 ~ 18447030 (-) | True | G328236 |
| TU371042 | other | downstream | 482628 | 18283777 ~ 18285410 (-) | True | LOC110522229 |
| TU370698 | other | downstream | 967569 | 17795190 ~ 17800469 (-) | True | G327409 |
| TU370509 | other | downstream | 1201891 | 17562870 ~ 17566147 (-) | True | vgll2a |
| TU369118 | other | downstream | 2105157 | 16646755 ~ 16662881 (-) | True | G325960 |
| TU372144 | other | upstream | 26857 | 18795106 ~ 18862375 (-) | False | G328760 |
| TU373182 | other | upstream | 512889 | 19281138 ~ 19281481 (-) | True | G329663 |
| TU373202 | other | upstream | 542844 | 19311093 ~ 19318679 (-) | True | G329681 |
| TU373442 | other | upstream | 925315 | 19693564 ~ 19728627 (-) | True | LOC110522258 |
| TU373781 | other | upstream | 1512877 | 20281126 ~ 20286800 (-) | True | rcan2 |
