Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU373112 |
| length | 477 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G329601 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 20219015 ~ 20219491 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU373101 | lncRNA | upstream | 15019 | 20203568 ~ 20203996 (+) | True | G329590 |
| TU373084 | lncRNA | upstream | 61033 | 20156276 ~ 20157982 (+) | True | G329573 |
| TU372991 | lncRNA | upstream | 230083 | 19988394 ~ 19988932 (+) | False | G329493 |
| TU372992 | lncRNA | upstream | 230083 | 19988394 ~ 19988932 (+) | True | G329493 |
| TU372971 | lncRNA | upstream | 265097 | 19951181 ~ 19953918 (+) | True | G329473 |
| TU373115 | lncRNA | downstream | 1939 | 20221430 ~ 20221686 (+) | True | G329604 |
| TU373116 | lncRNA | downstream | 2351 | 20221842 ~ 20222049 (+) | True | G329605 |
| TU373118 | lncRNA | downstream | 5036 | 20224527 ~ 20224822 (+) | True | G329607 |
| TU373121 | lncRNA | downstream | 9381 | 20228872 ~ 20229151 (+) | True | G329610 |
| TU373124 | lncRNA | downstream | 17457 | 20236948 ~ 20237307 (+) | True | G329613 |
| XM_036975434.1 | mRNA | upstream | 60170 | 20059607 ~ 20158845 (+) | False | msra |
| XM_036975439.1 | mRNA | upstream | 60170 | 20059607 ~ 20158845 (+) | False | msra |
| XM_036975436.1 | mRNA | upstream | 60170 | 20081287 ~ 20158845 (+) | True | msra |
| NM_001160616.1 | mRNA | upstream | 60172 | 20055807 ~ 20158843 (+) | False | msra |
| XM_021600533.2 | mRNA | downstream | 84229 | 20303720 ~ 20309419 (+) | True | slc25a27 |
| XM_021600537.2 | mRNA | downstream | 107604 | 20327095 ~ 20328613 (+) | False | LOC110522276 |
| LOC110522280 | mRNA | downstream | 200713 | 20420204 ~ 20422517 (+) | False | LOC110522280 |
| XR_005051485.1 | mRNA | downstream | 208402 | 20427893 ~ 20431723 (+) | False | LOC118964445 |
| XM_021600539.2 | mRNA | downstream | 214283 | 20433774 ~ 20471815 (+) | False | LOC110522277 |
| TU373066 | other | upstream | 118959 | 20097356 ~ 20100056 (+) | True | G329556 |
| TU372530 | other | upstream | 948490 | 19269416 ~ 19270525 (+) | False | LOC110522251 |
| TU372517 | other | upstream | 950459 | 19264038 ~ 19268556 (+) | True | LOC110522250 |
| TU371898 | other | upstream | 1289938 | 18923706 ~ 18929077 (+) | True | LOC110522244 |
| TU371796 | other | upstream | 1412211 | 18794581 ~ 18806804 (+) | True | G328446 |
| TU373137 | other | downstream | 33276 | 20252767 ~ 20253911 (+) | True | G329626 |
| TU374473 | other | downstream | 601177 | 20820668 ~ 20821157 (+) | True | G330771 |
| TU375366 | other | downstream | 1464443 | 21683934 ~ 21688608 (+) | False | LOC110522308 |
| TU375361 | other | downstream | 1469481 | 21688972 ~ 21701614 (+) | True | LOC110522308 |
| TU376355 | other | downstream | 2279009 | 22498500 ~ 22498996 (+) | True | G332458 |
