Item | Value |
---|---|
RNA id | TU378148 |
length | 641 |
lncRNA type | antisense_over |
GC content | 0.48 |
exon number | 2 |
gene id | G334078 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048568.1 |
NCBI id | CM023222.3 |
chromosome length | 46841314 |
location | 23808854 ~ 23809760 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU377437 | lncRNA | upstream | 35863 | 23768487 ~ 23772991 (+) | True | LOC110522416 |
TU377436 | lncRNA | upstream | 35913 | 23768487 ~ 23772941 (+) | False | LOC110522416 |
TU377558 | lncRNA | upstream | 70714 | 23735093 ~ 23738140 (+) | True | G333528 |
TU377538 | lncRNA | upstream | 123989 | 23684555 ~ 23684865 (+) | True | G333508 |
TU377537 | lncRNA | upstream | 127302 | 23681353 ~ 23681552 (+) | True | G333507 |
TU378177 | lncRNA | downstream | 10821 | 23820581 ~ 23820857 (+) | True | G334105 |
TU378182 | lncRNA | downstream | 15542 | 23825302 ~ 23825540 (+) | True | G334110 |
TU378190 | lncRNA | downstream | 25877 | 23835637 ~ 23837875 (+) | False | G334116 |
TU378195 | lncRNA | downstream | 26113 | 23835873 ~ 23836532 (+) | False | G334116 |
TU378193 | lncRNA | downstream | 26192 | 23835952 ~ 23837797 (+) | False | G334116 |
XM_021600791.2 | mRNA | upstream | 7347 | 23778611 ~ 23801507 (+) | True | si:ch211-225h24.2 |
XR_002473313.2 | mRNA | upstream | 37850 | 23768489 ~ 23771004 (+) | False | LOC110522416 |
XM_021600794.2 | mRNA | upstream | 60461 | 23745535 ~ 23748393 (+) | False | ccdc167 |
XM_036975963.1 | mRNA | upstream | 89188 | 23666631 ~ 23719666 (+) | False | nhsl1b |
XM_021600788.2 | mRNA | downstream | 56980 | 23866740 ~ 23879587 (+) | False | acp1 |
XM_036975975.1 | mRNA | downstream | 56980 | 23866740 ~ 23879587 (+) | False | acp1 |
XM_036975977.1 | mRNA | downstream | 56980 | 23866740 ~ 23879587 (+) | False | acp1 |
XM_036975978.1 | mRNA | downstream | 56991 | 23866751 ~ 23879587 (+) | False | acp1 |
XM_021600787.2 | mRNA | downstream | 57031 | 23866791 ~ 23879587 (+) | False | acp1 |
TU377442 | other | upstream | 60583 | 23745829 ~ 23748271 (+) | True | ccdc167 |
TU377043 | other | upstream | 850658 | 22955879 ~ 22958196 (+) | True | G333079 |
TU376404 | other | upstream | 1215492 | 22592930 ~ 22593362 (+) | True | G332507 |
TU376355 | other | upstream | 1309858 | 22498500 ~ 22498996 (+) | True | G332458 |
TU375361 | other | upstream | 2107240 | 21688972 ~ 21701614 (+) | True | LOC110522308 |
TU378192 | other | downstream | 24061 | 23833821 ~ 23834422 (+) | False | G334116 |
TU378440 | other | downstream | 254071 | 24063831 ~ 24069676 (+) | False | si:ch211-51e12.7 |
TU378609 | other | downstream | 607822 | 24417582 ~ 24418946 (+) | True | G334475 |
TU378607 | other | downstream | 610354 | 24420114 ~ 24422731 (+) | True | G334473 |
TU379995 | other | downstream | 2241293 | 26051053 ~ 26057691 (+) | True | LOC110522376 |