Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU378193 |
| length | 1846 |
| lncRNA type | antisense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G334116 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 23833821 ~ 23837875 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
23,832,000
23,832,400
23,832,800
23,833,200
23,833,600
23,834,000
23,834,400
23,834,800
23,835,200
23,835,600
23,836,000
23,836,400
23,836,800
23,837,200
23,837,600
23,838,000
23,838,400
23,838,800
23,839,200
23,839,600
NC_048568.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU378182 | lncRNA | upstream | 10412 | 23825302 ~ 23825540 (+) | True | G334110 |
| TU378177 | lncRNA | upstream | 15095 | 23820581 ~ 23820857 (+) | True | G334105 |
| TU378148 | lncRNA | upstream | 26192 | 23808854 ~ 23809760 (+) | True | G334078 |
| TU377437 | lncRNA | upstream | 62961 | 23768487 ~ 23772991 (+) | True | LOC110522416 |
| TU377436 | lncRNA | upstream | 63011 | 23768487 ~ 23772941 (+) | False | LOC110522416 |
| TU378211 | lncRNA | downstream | 19758 | 23857555 ~ 23857813 (+) | True | G334132 |
| TU378212 | lncRNA | downstream | 21271 | 23859068 ~ 23859361 (+) | True | G334133 |
| TU378247 | lncRNA | downstream | 93091 | 23930888 ~ 23931256 (+) | True | G334162 |
| TU378412 | lncRNA | downstream | 175871 | 24013668 ~ 24013885 (+) | True | G334311 |
| TU378413 | lncRNA | downstream | 178940 | 24016737 ~ 24017204 (+) | True | G334312 |
| XM_021600791.2 | mRNA | upstream | 34445 | 23778611 ~ 23801507 (+) | True | si:ch211-225h24.2 |
| XR_002473313.2 | mRNA | upstream | 64948 | 23768489 ~ 23771004 (+) | False | LOC110522416 |
| XM_021600794.2 | mRNA | upstream | 87559 | 23745535 ~ 23748393 (+) | False | ccdc167 |
| XM_036975966.1 | mRNA | upstream | 116286 | 23666631 ~ 23719666 (+) | False | nhsl1b |
| XM_021600788.2 | mRNA | downstream | 28943 | 23866740 ~ 23879587 (+) | False | acp1 |
| XM_036975975.1 | mRNA | downstream | 28943 | 23866740 ~ 23879587 (+) | False | acp1 |
| XM_036975977.1 | mRNA | downstream | 28943 | 23866740 ~ 23879587 (+) | False | acp1 |
| XM_036975978.1 | mRNA | downstream | 28954 | 23866751 ~ 23879587 (+) | False | acp1 |
| XM_021600787.2 | mRNA | downstream | 28994 | 23866791 ~ 23879587 (+) | False | acp1 |
| TU378192 | other | upstream | 1530 | 23833821 ~ 23834422 (+) | False | G334116 |
| TU377442 | other | upstream | 87681 | 23745829 ~ 23748271 (+) | True | ccdc167 |
| TU377043 | other | upstream | 877756 | 22955879 ~ 22958196 (+) | True | G333079 |
| TU376404 | other | upstream | 1242590 | 22592930 ~ 22593362 (+) | True | G332507 |
| TU376355 | other | upstream | 1336956 | 22498500 ~ 22498996 (+) | True | G332458 |
| TU378440 | other | downstream | 226034 | 24063831 ~ 24069676 (+) | False | si:ch211-51e12.7 |
| TU378609 | other | downstream | 579785 | 24417582 ~ 24418946 (+) | True | G334475 |
| TU378607 | other | downstream | 582317 | 24420114 ~ 24422731 (+) | True | G334473 |
| TU379995 | other | downstream | 2213256 | 26051053 ~ 26057691 (+) | True | LOC110522376 |
| TU380919 | other | downstream | 3055338 | 26893135 ~ 26894837 (+) | False | G336464 |
