Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030600 |
| length | 2667 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 19 |
| gene id | XLOC_015258 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 10821127 ~ 10857898 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| GO:0055105 | ubiquitin-protein transferase inhibitor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041114-120 | Predicted to enable ubiquitin-protein transferase inhibitor activity. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in arteriovenous malformation and glomus tumor. Orthologous to human GLMN (glomulin, FKBP associated protein). |
| ensembl_id | ENSDART00000081094 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033489 | lncRNA | upstream | 213825 | 10604513 ~ 10607329 (+) | True | XLOC_015254 |
| TCONS_00033488 | lncRNA | upstream | 256768 | 10563499 ~ 10564386 (+) | True | XLOC_015253 |
| TCONS_00030592 | lncRNA | upstream | 404882 | 10386479 ~ 10416272 (+) | True | XLOC_015252 |
| TCONS_00033487 | lncRNA | upstream | 535525 | 10284761 ~ 10285629 (+) | True | XLOC_015251 |
| TCONS_00030570 | lncRNA | upstream | 982505 | 9838071 ~ 9838649 (+) | True | XLOC_015238 |
| TCONS_00030612 | lncRNA | downstream | 197419 | 11055316 ~ 11063844 (+) | True | XLOC_015262 |
| TCONS_00030616 | lncRNA | downstream | 350566 | 11208463 ~ 11209682 (+) | True | XLOC_015264 |
| TCONS_00033490 | lncRNA | downstream | 771105 | 11629002 ~ 11633323 (+) | False | XLOC_015266 |
| TCONS_00033491 | lncRNA | downstream | 771114 | 11629011 ~ 11633323 (+) | False | XLOC_015266 |
| TCONS_00033492 | lncRNA | downstream | 771146 | 11629043 ~ 11633323 (+) | True | XLOC_015266 |
| TCONS_00030598 | mRNA | upstream | 35288 | 10771787 ~ 10785866 (+) | True | XLOC_015257 |
| TCONS_00030597 | mRNA | upstream | 35505 | 10766744 ~ 10785649 (+) | False | XLOC_015257 |
| TCONS_00030595 | mRNA | upstream | 60638 | 10709557 ~ 10760516 (+) | False | XLOC_015256 |
| TCONS_00030603 | mRNA | downstream | 20509 | 10878406 ~ 10880549 (+) | True | XLOC_015259 |
| TCONS_00030604 | mRNA | downstream | 56126 | 10914023 ~ 10931770 (+) | True | XLOC_015260 |
| TCONS_00030606 | mRNA | downstream | 171026 | 11028923 ~ 11063679 (+) | False | XLOC_015262 |
| TCONS_00030607 | mRNA | downstream | 171241 | 11029138 ~ 11039033 (+) | False | XLOC_015262 |
| TCONS_00030608 | mRNA | downstream | 171241 | 11029138 ~ 11063878 (+) | False | XLOC_015262 |
| TCONS_00030590 | other | upstream | 615036 | 10206001 ~ 10206118 (+) | True | XLOC_015249 |
| TCONS_00030577 | other | upstream | 838201 | 9973881 ~ 9982953 (+) | True | XLOC_015242 |
| TCONS_00030571 | other | upstream | 945509 | 9875529 ~ 9875645 (+) | True | XLOC_015239 |
| TCONS_00030569 | other | upstream | 979290 | 9838032 ~ 9841864 (+) | False | XLOC_015238 |
| TCONS_00030568 | other | upstream | 987348 | 9831338 ~ 9833806 (+) | False | XLOC_015238 |
| TCONS_00030605 | other | downstream | 148760 | 11006657 ~ 11006790 (+) | True | XLOC_015261 |
| TCONS_00030617 | other | downstream | 385989 | 11243886 ~ 11244007 (+) | True | XLOC_015265 |
| TCONS_00030621 | other | downstream | 899027 | 11756924 ~ 11764998 (+) | False | XLOC_015269 |
| TCONS_00030632 | other | downstream | 1518925 | 12376822 ~ 12378603 (+) | False | XLOC_015273 |
| TCONS_00030633 | other | downstream | 1536726 | 12394623 ~ 12394983 (+) | False | XLOC_015273 |
