Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030619 |
| length | 1968 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | XLOC_015268 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 11670270 ~ 11677705 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070705-491 | Predicted to enable zinc ion binding activity. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region. Orthologous to human RNF135 (ring finger protein 135). |
| ensembl_id | ENSDART00000100524 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030618 | lncRNA | upstream | 21432 | 11648163 ~ 11648838 (+) | True | XLOC_015267 |
| TCONS_00033490 | lncRNA | upstream | 36947 | 11629002 ~ 11633323 (+) | False | XLOC_015266 |
| TCONS_00033491 | lncRNA | upstream | 36947 | 11629011 ~ 11633323 (+) | False | XLOC_015266 |
| TCONS_00033492 | lncRNA | upstream | 36947 | 11629043 ~ 11633323 (+) | True | XLOC_015266 |
| TCONS_00030616 | lncRNA | upstream | 460588 | 11208463 ~ 11209682 (+) | True | XLOC_015264 |
| TCONS_00033493 | lncRNA | downstream | 958222 | 12635927 ~ 12637877 (+) | True | XLOC_015274 |
| TCONS_00030635 | lncRNA | downstream | 1120661 | 12798366 ~ 12802906 (+) | True | XLOC_015275 |
| TCONS_00033242 | lncRNA | downstream | 1169955 | 12847660 ~ 12852426 (+) | True | XLOC_015276 |
| TCONS_00033243 | lncRNA | downstream | 1669695 | 13347400 ~ 13351251 (+) | False | XLOC_015280 |
| TCONS_00033494 | lncRNA | downstream | 1669757 | 13347462 ~ 13351299 (+) | True | XLOC_015280 |
| TCONS_00030614 | mRNA | upstream | 460102 | 11205795 ~ 11210168 (+) | False | XLOC_015264 |
| TCONS_00030615 | mRNA | upstream | 461522 | 11206317 ~ 11208748 (+) | False | XLOC_015264 |
| TCONS_00030613 | mRNA | upstream | 544049 | 11119315 ~ 11126221 (+) | True | XLOC_015263 |
| TCONS_00030608 | mRNA | upstream | 606392 | 11029138 ~ 11063878 (+) | False | XLOC_015262 |
| TCONS_00030620 | mRNA | downstream | 8037 | 11685742 ~ 11833284 (+) | False | XLOC_015269 |
| TCONS_00030622 | mRNA | downstream | 82843 | 11760548 ~ 11833356 (+) | True | XLOC_015269 |
| TCONS_00030623 | mRNA | downstream | 245910 | 11923615 ~ 11945936 (+) | False | XLOC_015270 |
| TCONS_00030624 | mRNA | downstream | 246119 | 11923824 ~ 11944959 (+) | True | XLOC_015270 |
| TCONS_00030625 | mRNA | downstream | 268849 | 11946554 ~ 11998297 (+) | False | XLOC_015271 |
| TCONS_00030617 | other | upstream | 426263 | 11243886 ~ 11244007 (+) | True | XLOC_015265 |
| TCONS_00030605 | other | upstream | 663480 | 11006657 ~ 11006790 (+) | True | XLOC_015261 |
| TCONS_00030590 | other | upstream | 1464152 | 10206001 ~ 10206118 (+) | True | XLOC_015249 |
| TCONS_00030577 | other | upstream | 1687317 | 9973881 ~ 9982953 (+) | True | XLOC_015242 |
| TCONS_00030571 | other | upstream | 1794625 | 9875529 ~ 9875645 (+) | True | XLOC_015239 |
| TCONS_00030621 | other | downstream | 79219 | 11756924 ~ 11764998 (+) | False | XLOC_015269 |
| TCONS_00030632 | other | downstream | 699117 | 12376822 ~ 12378603 (+) | False | XLOC_015273 |
| TCONS_00030633 | other | downstream | 716918 | 12394623 ~ 12394983 (+) | False | XLOC_015273 |
| TCONS_00030634 | other | downstream | 723550 | 12401255 ~ 12404031 (+) | True | XLOC_015273 |
| TCONS_00030641 | other | downstream | 1445861 | 13123566 ~ 13123682 (+) | True | XLOC_015279 |
