Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030631 |
| length | 6906 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 22 |
| gene id | XLOC_015273 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 12302527 ~ 12406641 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0005096 | GTPase activator activity | molecular_function |
| GO:0005543 | phospholipid binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-4944 | Predicted to enable GTPase activator activity and phospholipid binding activity. Predicted to act upstream of or within signal transduction. Orthologous to human ARHGAP21 (Rho GTPase activating protein 21). |
| ensembl_id | ENSDART00000134083 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030618 | lncRNA | upstream | 701032 | 11648163 ~ 11648838 (+) | True | XLOC_015267 |
| TCONS_00033490 | lncRNA | upstream | 716547 | 11629002 ~ 11633323 (+) | False | XLOC_015266 |
| TCONS_00033491 | lncRNA | upstream | 716547 | 11629011 ~ 11633323 (+) | False | XLOC_015266 |
| TCONS_00033492 | lncRNA | upstream | 716547 | 11629043 ~ 11633323 (+) | True | XLOC_015266 |
| TCONS_00030616 | lncRNA | upstream | 1140188 | 11208463 ~ 11209682 (+) | True | XLOC_015264 |
| TCONS_00033493 | lncRNA | downstream | 229286 | 12635927 ~ 12637877 (+) | True | XLOC_015274 |
| TCONS_00030635 | lncRNA | downstream | 391725 | 12798366 ~ 12802906 (+) | True | XLOC_015275 |
| TCONS_00033242 | lncRNA | downstream | 441019 | 12847660 ~ 12852426 (+) | True | XLOC_015276 |
| TCONS_00033243 | lncRNA | downstream | 940759 | 13347400 ~ 13351251 (+) | False | XLOC_015280 |
| TCONS_00033494 | lncRNA | downstream | 940821 | 13347462 ~ 13351299 (+) | True | XLOC_015280 |
| TCONS_00030627 | mRNA | upstream | 69362 | 12255568 ~ 12280508 (+) | False | XLOC_015272 |
| TCONS_00030628 | mRNA | upstream | 69401 | 12255575 ~ 12280469 (+) | True | XLOC_015272 |
| TCONS_00030626 | mRNA | upstream | 346695 | 11946554 ~ 12003175 (+) | True | XLOC_015271 |
| TCONS_00030625 | mRNA | upstream | 351573 | 11946554 ~ 11998297 (+) | False | XLOC_015271 |
| TCONS_00030623 | mRNA | upstream | 403934 | 11923615 ~ 11945936 (+) | False | XLOC_015270 |
| TCONS_00030636 | mRNA | downstream | 440961 | 12847602 ~ 12956329 (+) | False | XLOC_015276 |
| TCONS_00030637 | mRNA | downstream | 440973 | 12847614 ~ 13037544 (+) | False | XLOC_015276 |
| TCONS_00030638 | mRNA | downstream | 643584 | 13050225 ~ 13051517 (+) | True | XLOC_015277 |
| TCONS_00030639 | mRNA | downstream | 650161 | 13056802 ~ 13148453 (+) | False | XLOC_015278 |
| TCONS_00030640 | mRNA | downstream | 662527 | 13069168 ~ 13145704 (+) | True | XLOC_015278 |
| TCONS_00030621 | other | upstream | 584872 | 11756924 ~ 11764998 (+) | False | XLOC_015269 |
| TCONS_00030617 | other | upstream | 1105863 | 11243886 ~ 11244007 (+) | True | XLOC_015265 |
| TCONS_00030605 | other | upstream | 1343080 | 11006657 ~ 11006790 (+) | True | XLOC_015261 |
| TCONS_00030590 | other | upstream | 2143752 | 10206001 ~ 10206118 (+) | True | XLOC_015249 |
| TCONS_00030577 | other | upstream | 2366917 | 9973881 ~ 9982953 (+) | True | XLOC_015242 |
| TCONS_00030641 | other | downstream | 716925 | 13123566 ~ 13123682 (+) | True | XLOC_015279 |
| TCONS_00030650 | other | downstream | 2253715 | 14660356 ~ 14660546 (+) | True | XLOC_015290 |
| TCONS_00030651 | other | downstream | 2258527 | 14665168 ~ 14665353 (+) | True | XLOC_015291 |
| TCONS_00030652 | other | downstream | 2264356 | 14670997 ~ 14671173 (+) | True | XLOC_015292 |
| TCONS_00030653 | other | downstream | 2269154 | 14675795 ~ 14675985 (+) | True | XLOC_015293 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000004_02571511_02598869.mRNA | True | 6822 | mRNA | 0.50 | 20 | CI01000004 | 2571311 ~ 2600082 (-) |
