Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030642 |
| length | 2094 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 11 |
| gene id | XLOC_015281 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 13462305 ~ 13673494 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ko04990 | Domain-containing proteins not elsewhere classified |
| id | description |
|---|---|
| ZDB-GENE-110411-266 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CFAP57 (cilia and flagella associated protein 57). |
| ensembl_id | ENSDART00000149309 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033494 | lncRNA | upstream | 111006 | 13347462 ~ 13351299 (+) | True | XLOC_015280 |
| TCONS_00033243 | lncRNA | upstream | 111054 | 13347400 ~ 13351251 (+) | False | XLOC_015280 |
| TCONS_00033242 | lncRNA | upstream | 609879 | 12847660 ~ 12852426 (+) | True | XLOC_015276 |
| TCONS_00030635 | lncRNA | upstream | 659399 | 12798366 ~ 12802906 (+) | True | XLOC_015275 |
| TCONS_00033493 | lncRNA | upstream | 824428 | 12635927 ~ 12637877 (+) | True | XLOC_015274 |
| TCONS_00033496 | lncRNA | downstream | 393481 | 13950058 ~ 13958576 (+) | False | XLOC_015285 |
| TCONS_00033495 | lncRNA | downstream | 393481 | 13950058 ~ 13958576 (+) | False | XLOC_015285 |
| TCONS_00033244 | lncRNA | downstream | 393574 | 13950151 ~ 13954515 (+) | False | XLOC_015285 |
| TCONS_00033497 | lncRNA | downstream | 393692 | 13950269 ~ 13958576 (+) | True | XLOC_015285 |
| TCONS_00033498 | lncRNA | downstream | 404552 | 13961129 ~ 13962397 (+) | True | XLOC_015286 |
| TCONS_00030639 | mRNA | upstream | 313852 | 13056802 ~ 13148453 (+) | False | XLOC_015278 |
| TCONS_00030640 | mRNA | upstream | 316601 | 13069168 ~ 13145704 (+) | True | XLOC_015278 |
| TCONS_00030638 | mRNA | upstream | 410788 | 13050225 ~ 13051517 (+) | True | XLOC_015277 |
| TCONS_00030637 | mRNA | upstream | 424761 | 12847614 ~ 13037544 (+) | False | XLOC_015276 |
| TCONS_00030636 | mRNA | upstream | 505976 | 12847602 ~ 12956329 (+) | False | XLOC_015276 |
| TCONS_00030645 | mRNA | downstream | 137873 | 13694450 ~ 13721149 (+) | False | XLOC_015282 |
| TCONS_00030644 | mRNA | downstream | 137873 | 13694450 ~ 13721149 (+) | False | XLOC_015282 |
| TCONS_00030646 | mRNA | downstream | 153862 | 13710439 ~ 13717739 (+) | True | XLOC_015282 |
| TCONS_00030647 | mRNA | downstream | 165311 | 13721888 ~ 13800596 (+) | False | XLOC_015283 |
| TCONS_00030648 | mRNA | downstream | 165539 | 13722116 ~ 13788072 (+) | True | XLOC_015283 |
| TCONS_00030641 | other | upstream | 338623 | 13123566 ~ 13123682 (+) | True | XLOC_015279 |
| TCONS_00030634 | other | upstream | 1058274 | 12401255 ~ 12404031 (+) | True | XLOC_015273 |
| TCONS_00030633 | other | upstream | 1067322 | 12394623 ~ 12394983 (+) | False | XLOC_015273 |
| TCONS_00030632 | other | upstream | 1083702 | 12376822 ~ 12378603 (+) | False | XLOC_015273 |
| TCONS_00030621 | other | upstream | 1697307 | 11756924 ~ 11764998 (+) | False | XLOC_015269 |
| TCONS_00030650 | other | downstream | 1103779 | 14660356 ~ 14660546 (+) | True | XLOC_015290 |
| TCONS_00030651 | other | downstream | 1108591 | 14665168 ~ 14665353 (+) | True | XLOC_015291 |
| TCONS_00030652 | other | downstream | 1114420 | 14670997 ~ 14671173 (+) | True | XLOC_015292 |
| TCONS_00030653 | other | downstream | 1119218 | 14675795 ~ 14675985 (+) | True | XLOC_015293 |
| TCONS_00030654 | other | downstream | 1156817 | 14713394 ~ 14713538 (+) | True | XLOC_015294 |
