RNA id: TCONS_00030658



Basic Information


Item Value
RNA id TCONS_00030658
length 832
RNA type processed_transcript
GC content 0.37
exon number 3
gene id XLOC_015301
representative True

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 14970007 ~ 14971019 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTCAAACGAAAAAGGCCCAGAAAAATGGAATGCGTGTCTCAGGCACCTGTACTCTCGGGTGAAAACAAATGTAGtaagttaataaaaaatagaaaagttGTCACAAAGTATCACTTGATTCATATGTTTAATGTTATGACAAATTATagcaaatatacatttatacatgtaACTTTTACCTTTTGCCATTTATTGCAtctttgtcttttattttaagtGTTAAATAGAGGTTTGTATGTAGCATTGTAAAGGTGATGCACTTGACAATATCTTAGTTTTTCCTCCTTCAGCCATGGATCCAAAAGGAGGCCTTTGTGATTTACCATCAGACCTGCTCAGACAGATTCTTCTAGATGTTGTTTTCGATGAAGGAGATGGAGCCTTCCTCACACTCTCACTTGTGTGAAGAAAGTTTTGTGACATTGTCTGCAGTCAAGTTTTCCGTAGAAAATATCACTTGGCCTGGCTCGACAgcatCACTGACTGGAAATCTACAAGTCCAGATATAAAAGACAAATAAAGAGTGGAGTTCAAACTCTCCACGTGTGAATCATGTGGTTGGCTGTACAAAGACACAATTGGATACTGTGGTGATGGGAAGAAAGGGGTGTATAGAGCTTTTTATTCTGACAAAGAGTTCGATGGCTACTGCTCGATGCACTGCTTCTATacaatgaatgactgaatgaatggatggCTGGATTTGTAGTTACGGATGGTATTCGTGGCTAACTGATGGATGATTGGATTTGTGGTGAATGGAAGAGGatggatttgtttatttgatttaaatttgtttgtttttttgttgattAAACAAATGTTTCATGGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000134558

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033248 lncRNA upstream 4961 14961434 ~ 14965046 (+) True XLOC_015300
TCONS_00033506 lncRNA upstream 8214 14954319 ~ 14961793 (+) False XLOC_015300
TCONS_00033247 lncRNA upstream 32513 14937194 ~ 14937494 (+) True XLOC_015299
TCONS_00033246 lncRNA upstream 178875 14790803 ~ 14791132 (+) True XLOC_015298
TCONS_00033502 lncRNA upstream 463385 14502058 ~ 14506622 (+) False XLOC_015289
TCONS_00033507 lncRNA downstream 500664 15471683 ~ 15480725 (+) True XLOC_015308
TCONS_00030670 lncRNA downstream 652674 15623693 ~ 15626967 (+) True XLOC_015310
TCONS_00030674 lncRNA downstream 862534 15833553 ~ 15844036 (+) True XLOC_015312
TCONS_00030678 lncRNA downstream 1189963 16160982 ~ 16166102 (+) True XLOC_015314
TCONS_00030683 lncRNA downstream 1206396 16177415 ~ 16191890 (+) False XLOC_015315
TCONS_00030649 mRNA upstream 1029090 13907452 ~ 13940917 (+) True XLOC_015284
TCONS_00030647 mRNA upstream 1169411 13721888 ~ 13800596 (+) False XLOC_015283
TCONS_00030648 mRNA upstream 1181935 13722116 ~ 13788072 (+) True XLOC_015283
TCONS_00030644 mRNA upstream 1248858 13694450 ~ 13721149 (+) False XLOC_015282
TCONS_00030659 mRNA downstream 21860 14992879 ~ 14995050 (+) True XLOC_015302
TCONS_00030660 mRNA downstream 77391 15048410 ~ 15075295 (+) False XLOC_015303
TCONS_00030661 mRNA downstream 97992 15069011 ~ 15075293 (+) True XLOC_015303
TCONS_00030662 mRNA downstream 129723 15100742 ~ 15106968 (+) True XLOC_015304
TCONS_00030663 mRNA downstream 157008 15128027 ~ 15198117 (+) False XLOC_015305
TCONS_00030657 other upstream 189932 14779104 ~ 14780075 (+) True XLOC_015297
TCONS_00030656 other upstream 202381 14767477 ~ 14767626 (+) True XLOC_015296
TCONS_00030655 other upstream 244861 14724960 ~ 14725146 (+) True XLOC_015295
TCONS_00030654 other upstream 256469 14713394 ~ 14713538 (+) True XLOC_015294
TCONS_00030653 other upstream 294022 14675795 ~ 14675985 (+) True XLOC_015293
TCONS_00030665 other downstream 202248 15173267 ~ 15173383 (+) True XLOC_015306
TCONS_00030675 other downstream 897406 15868425 ~ 15868540 (+) True XLOC_015313
TCONS_00030677 other downstream 1189924 16160943 ~ 16161569 (+) False XLOC_015314
TCONS_00030714 other downstream 1853740 16824759 ~ 16824819 (+) True XLOC_015329
TCONS_00030715 other downstream 1858670 16829689 ~ 16829764 (+) True XLOC_015330

Expression Profile


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