Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030681 |
| length | 1431 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | XLOC_015315 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 16173999 ~ 16210623 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-030131-6851 | Predicted to act upstream of or within apoptotic process. Predicted to be located in Golgi membrane and mitochondrial outer membrane. Orthologous to human SH3GLB1 (SH3 domain containing GRB2 like, endophilin B1). |
| ensembl_id | ENSDART00000190186 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030678 | lncRNA | upstream | 7897 | 16160982 ~ 16166102 (+) | True | XLOC_015314 |
| TCONS_00030674 | lncRNA | upstream | 329963 | 15833553 ~ 15844036 (+) | True | XLOC_015312 |
| TCONS_00030670 | lncRNA | upstream | 547032 | 15623693 ~ 15626967 (+) | True | XLOC_015310 |
| TCONS_00033507 | lncRNA | upstream | 693274 | 15471683 ~ 15480725 (+) | True | XLOC_015308 |
| TCONS_00033248 | lncRNA | upstream | 1208953 | 14961434 ~ 14965046 (+) | True | XLOC_015300 |
| TCONS_00033249 | lncRNA | downstream | 333308 | 16527198 ~ 16528680 (+) | True | XLOC_015320 |
| TCONS_00030699 | lncRNA | downstream | 516993 | 16710883 ~ 16724646 (+) | False | XLOC_015326 |
| TCONS_00030705 | lncRNA | downstream | 586841 | 16780731 ~ 16785617 (+) | False | XLOC_015327 |
| TCONS_00033508 | lncRNA | downstream | 712856 | 16906746 ~ 16911593 (+) | True | XLOC_015332 |
| TCONS_00033509 | lncRNA | downstream | 1141927 | 17335817 ~ 17359020 (+) | False | XLOC_015335 |
| TCONS_00030676 | mRNA | upstream | 1742 | 16160906 ~ 16172257 (+) | False | XLOC_015314 |
| TCONS_00030671 | mRNA | upstream | 228846 | 15776156 ~ 15945153 (+) | False | XLOC_015311 |
| TCONS_00030672 | mRNA | upstream | 228846 | 15776408 ~ 15945153 (+) | False | XLOC_015311 |
| TCONS_00030673 | mRNA | upstream | 273812 | 15776649 ~ 15900187 (+) | True | XLOC_015311 |
| TCONS_00030669 | mRNA | upstream | 547027 | 15612755 ~ 15626972 (+) | False | XLOC_015310 |
| TCONS_00030686 | mRNA | downstream | 255737 | 16449627 ~ 16458472 (+) | False | XLOC_015316 |
| TCONS_00030687 | mRNA | downstream | 259879 | 16453769 ~ 16458472 (+) | True | XLOC_015316 |
| TCONS_00030688 | mRNA | downstream | 266431 | 16460321 ~ 16479291 (+) | False | XLOC_015317 |
| TCONS_00030689 | mRNA | downstream | 266933 | 16460823 ~ 16472296 (+) | True | XLOC_015317 |
| TCONS_00030690 | mRNA | downstream | 288448 | 16482338 ~ 16485408 (+) | True | XLOC_015318 |
| TCONS_00030677 | other | upstream | 12430 | 16160943 ~ 16161569 (+) | False | XLOC_015314 |
| TCONS_00030675 | other | upstream | 305459 | 15868425 ~ 15868540 (+) | True | XLOC_015313 |
| TCONS_00030665 | other | upstream | 1000616 | 15173267 ~ 15173383 (+) | True | XLOC_015306 |
| TCONS_00030658 | other | upstream | 1202980 | 14970007 ~ 14971019 (+) | True | XLOC_015301 |
| TCONS_00030657 | other | upstream | 1393924 | 14779104 ~ 14780075 (+) | True | XLOC_015297 |
| TCONS_00030714 | other | downstream | 630869 | 16824759 ~ 16824819 (+) | True | XLOC_015329 |
| TCONS_00030715 | other | downstream | 635799 | 16829689 ~ 16829764 (+) | True | XLOC_015330 |
| TCONS_00030726 | other | downstream | 1464068 | 17657958 ~ 17658076 (+) | True | XLOC_015342 |
| TCONS_00030730 | other | downstream | 2308418 | 18502308 ~ 18502424 (+) | True | XLOC_015347 |
| TCONS_00030744 | other | downstream | 3311400 | 19505290 ~ 19507193 (+) | True | XLOC_015352 |
