RNA id: TU392802


Basic Information

Item Value
RNA id TU392802
length 206
RNA type TUCP
GC content 0.55
exon number 1
gene id G347178
representative True

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35908246 ~ 35908451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aggtgaacatggtcatagagacggtccagatcgagggtggggactgtctccctgtacaggtgaacatggtcatagagacggtccagatcgagggtggggactgtctccctgtacaggtgaacatggtcatagagacagtccagatcgagggtggggactgtctccctgtacaggtgaacatggtcatagagacggtccagatcgag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU392801 lncRNA upstream 306 35907689 ~ 35907940 (+) True G347177
TU392797 lncRNA upstream 6931 35901101 ~ 35901315 (+) True G347173
TU392759 lncRNA upstream 24005 35883194 ~ 35884241 (+) True LOC118964470
TU392778 lncRNA upstream 65967 35841957 ~ 35842279 (+) True G347155
TU392776 lncRNA upstream 68581 35839390 ~ 35839665 (+) True G347153
TU392838 lncRNA downstream 72697 35981148 ~ 35981926 (+) True G347210
TU392869 lncRNA downstream 216957 36125408 ~ 36128082 (+) False G347233
TU392870 lncRNA downstream 216957 36125408 ~ 36128082 (+) False G347233
TU392871 lncRNA downstream 216957 36125408 ~ 36128082 (+) False G347233
TU392868 lncRNA downstream 217743 36126194 ~ 36128082 (+) False G347233
XR_005051526.1 mRNA upstream 24006 35883168 ~ 35884240 (+) False LOC118964470
XM_036976190.1 mRNA upstream 88938 35803950 ~ 35819308 (+) False LOC110522558
XM_021601019.2 mRNA downstream 130645 36039096 ~ 36123362 (+) False LOC110522562
XM_036976203.1 mRNA downstream 230505 36138956 ~ 36154366 (+) False LOC110522563
XM_036976197.1 mRNA downstream 230505 36138956 ~ 36154599 (+) False LOC110522563
XM_036976200.1 mRNA downstream 230505 36138956 ~ 36154599 (+) False LOC110522563
XM_036976201.1 mRNA downstream 230505 36138956 ~ 36154599 (+) False LOC110522563
TU392774 other upstream 74402 35833369 ~ 35833844 (+) True G347151
TU391880 other upstream 833908 35073939 ~ 35074338 (+) True G346334
TU391730 other upstream 1086064 34820442 ~ 34822182 (+) True LOC110522546
TU391481 other upstream 1368786 34537001 ~ 34539460 (+) True LOC110522530
TU391145 other upstream 1515983 34390973 ~ 34392263 (+) True LOC110522536
TU392876 other downstream 130715 36039166 ~ 36072956 (+) True LOC110522562
TU393877 other downstream 1251643 37160094 ~ 37161123 (+) True G348133
TU394044 other downstream 1537016 37445467 ~ 37497006 (+) False LOC110522576
TU395886 other downstream 2496194 38404645 ~ 38405464 (+) True G349855
TU395908 other downstream 2523728 38432179 ~ 38434024 (+) True G349877

Expression Profile