Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU398228 |
| length | 640 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G351840 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 40687346 ~ 40687985 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU398212 | lncRNA | upstream | 9176 | 40677676 ~ 40678170 (+) | False | G351826 |
| TU398211 | lncRNA | upstream | 9239 | 40677593 ~ 40678107 (+) | False | G351826 |
| TU398213 | lncRNA | upstream | 9239 | 40677676 ~ 40678107 (+) | True | G351826 |
| TU398214 | lncRNA | upstream | 12507 | 40674292 ~ 40674839 (+) | True | LOC110521109 |
| TU398224 | lncRNA | upstream | 19141 | 40667919 ~ 40668205 (+) | True | G351836 |
| TU398231 | lncRNA | downstream | 2351 | 40690336 ~ 40691039 (+) | True | G351843 |
| TU398235 | lncRNA | downstream | 11091 | 40699076 ~ 40699298 (+) | True | G351847 |
| TU398196 | lncRNA | downstream | 27671 | 40715656 ~ 40716059 (+) | True | G351816 |
| TU398450 | lncRNA | downstream | 43765 | 40731750 ~ 40732661 (+) | True | si:ch211-63o20.7 |
| TU398473 | lncRNA | downstream | 48252 | 40736237 ~ 40736542 (+) | True | G351940 |
| XM_036976314.1 | mRNA | upstream | 12769 | 40650654 ~ 40674577 (+) | False | LOC110521109 |
| XM_036976315.1 | mRNA | upstream | 12769 | 40650654 ~ 40674577 (+) | False | LOC110521109 |
| XM_036976312.1 | mRNA | upstream | 12769 | 40650655 ~ 40674577 (+) | False | LOC110521109 |
| XM_021598373.2 | mRNA | upstream | 56525 | 40626614 ~ 40630821 (+) | True | paqr8 |
| NM_001124651.1 | mRNA | upstream | 57662 | 40626393 ~ 40629684 (+) | False | paqr8 |
| XM_021601088.2 | mRNA | downstream | 20677 | 40708662 ~ 40714024 (+) | False | LOC110522626 |
| XM_021601089.2 | mRNA | downstream | 21307 | 40709292 ~ 40714024 (+) | True | LOC110522626 |
| XM_036976317.1 | mRNA | downstream | 33541 | 40721526 ~ 40732294 (+) | False | si:ch211-63o20.7 |
| XM_036976319.1 | mRNA | downstream | 33541 | 40721526 ~ 40732344 (+) | False | si:ch211-63o20.7 |
| XM_036976318.1 | mRNA | downstream | 33541 | 40721526 ~ 40732351 (+) | False | si:ch211-63o20.7 |
| TU397710 | other | upstream | 550573 | 40134687 ~ 40136773 (+) | False | G351441 |
| TU397708 | other | upstream | 550573 | 40134966 ~ 40136773 (+) | True | G351441 |
| TU396863 | other | upstream | 1297872 | 39388589 ~ 39389474 (+) | True | G350665 |
| TU396861 | other | upstream | 1297911 | 39388141 ~ 39389435 (+) | False | G350665 |
| TU396290 | other | upstream | 1782572 | 38903730 ~ 38904774 (+) | True | G350211 |
| TU398718 | other | downstream | 302174 | 40990159 ~ 40990505 (+) | True | G352136 |
| TU398979 | other | downstream | 522262 | 41210247 ~ 41210998 (+) | True | G352340 |
| TU398983 | other | downstream | 523128 | 41211113 ~ 41213949 (+) | True | G352341 |
| TU399156 | other | downstream | 678216 | 41366201 ~ 41366607 (+) | True | G352477 |
| TU399921 | other | downstream | 1436691 | 42124676 ~ 42125759 (+) | True | G353125 |
