Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU400266 |
| length | 1208 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 2 |
| gene id | G353398 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 42632283 ~ 42633512 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU400232 | lncRNA | upstream | 60161 | 42571675 ~ 42572122 (+) | True | G353375 |
| TU400206 | lncRNA | upstream | 110966 | 42521118 ~ 42521317 (+) | True | G353355 |
| TU400147 | lncRNA | upstream | 128169 | 42502757 ~ 42504114 (+) | True | G353308 |
| TU400142 | lncRNA | upstream | 137090 | 42494550 ~ 42495193 (+) | True | G353303 |
| TU400196 | lncRNA | upstream | 145547 | 42486496 ~ 42486736 (+) | True | G353348 |
| TU400268 | lncRNA | downstream | 1120 | 42634632 ~ 42642233 (+) | True | G353399 |
| TU400243 | lncRNA | downstream | 17260 | 42650772 ~ 42652162 (+) | False | G353383 |
| TU400246 | lncRNA | downstream | 17260 | 42650772 ~ 42652162 (+) | False | G353383 |
| TU400241 | lncRNA | downstream | 18200 | 42651712 ~ 42653695 (+) | False | G353383 |
| TU400242 | lncRNA | downstream | 18200 | 42651712 ~ 42653695 (+) | False | G353383 |
| XM_036976389.1 | mRNA | upstream | 1767 | 42521786 ~ 42630516 (+) | True | si:dkey-71h2.2 |
| XM_021601134.2 | mRNA | upstream | 117822 | 42460358 ~ 42514461 (+) | False | si:ch211-278j3.3 |
| XM_021601127.2 | mRNA | upstream | 117822 | 42460361 ~ 42514461 (+) | False | si:ch211-278j3.3 |
| XM_021601131.2 | mRNA | upstream | 117822 | 42460361 ~ 42514461 (+) | False | si:ch211-278j3.3 |
| XM_021601133.2 | mRNA | upstream | 117822 | 42460361 ~ 42514461 (+) | False | si:ch211-278j3.3 |
| XM_036976397.1 | mRNA | downstream | 620380 | 43253892 ~ 43278315 (+) | False | sh3bgrl2 |
| XM_036976398.1 | mRNA | downstream | 620380 | 43253892 ~ 43278315 (+) | False | sh3bgrl2 |
| XM_036976399.1 | mRNA | downstream | 653140 | 43286652 ~ 43291268 (+) | True | rps12 |
| XR_005051570.1 | mRNA | downstream | 653670 | 43287182 ~ 43287259 (+) | True | LOC118964509 |
| XM_036976408.1 | mRNA | downstream | 1070507 | 43704019 ~ 43722541 (+) | False | tbpl1 |
| TU400187 | other | upstream | 180874 | 42451032 ~ 42451409 (+) | True | G353339 |
| TU400176 | other | upstream | 188902 | 42442755 ~ 42443381 (+) | True | G353328 |
| TU400095 | other | upstream | 303646 | 42319700 ~ 42328637 (+) | False | LOC118964483 |
| TU400099 | other | upstream | 303646 | 42327880 ~ 42328637 (+) | True | LOC118964483 |
| TU399921 | other | upstream | 506524 | 42124676 ~ 42125759 (+) | True | G353125 |
| TU400784 | other | downstream | 277374 | 42910886 ~ 42912177 (+) | False | G353820 |
| TU400954 | other | downstream | 620391 | 43253903 ~ 43279017 (+) | True | sh3bgrl2 |
| TU401635 | other | downstream | 977450 | 43610962 ~ 43611562 (+) | True | G354462 |
| TU401825 | other | downstream | 1356611 | 43990123 ~ 43990639 (+) | True | G354630 |
| TU401884 | other | downstream | 1475567 | 44109079 ~ 44110024 (+) | True | myb |
