Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU400805 |
| length | 425 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G353831 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 42930878 ~ 42931492 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU400802 | lncRNA | upstream | 410 | 42930397 ~ 42930658 (+) | True | G353830 |
| TU400801 | lncRNA | upstream | 687 | 42930133 ~ 42930381 (+) | True | G353829 |
| TU400800 | lncRNA | upstream | 7518 | 42923242 ~ 42923550 (+) | True | G353828 |
| TU400786 | lncRNA | upstream | 18855 | 42911701 ~ 42912213 (+) | True | G353820 |
| TU400783 | lncRNA | upstream | 20230 | 42910560 ~ 42910838 (+) | True | G353819 |
| TU400811 | lncRNA | downstream | 283 | 42931775 ~ 42932084 (+) | False | G353832 |
| TU400807 | lncRNA | downstream | 311 | 42931803 ~ 42932084 (+) | False | G353832 |
| TU400812 | lncRNA | downstream | 311 | 42931803 ~ 42932127 (+) | True | G353832 |
| TU400813 | lncRNA | downstream | 2525 | 42934017 ~ 42934458 (+) | True | G353833 |
| TU400814 | lncRNA | downstream | 3304 | 42934796 ~ 42935505 (+) | True | G353834 |
| XM_036976389.1 | mRNA | upstream | 300552 | 42521786 ~ 42630516 (+) | True | si:dkey-71h2.2 |
| XM_021601134.2 | mRNA | upstream | 416607 | 42460358 ~ 42514461 (+) | False | si:ch211-278j3.3 |
| XM_036976397.1 | mRNA | downstream | 322400 | 43253892 ~ 43278315 (+) | False | sh3bgrl2 |
| XM_036976398.1 | mRNA | downstream | 322400 | 43253892 ~ 43278315 (+) | False | sh3bgrl2 |
| XM_036976399.1 | mRNA | downstream | 355160 | 43286652 ~ 43291268 (+) | True | rps12 |
| XR_005051570.1 | mRNA | downstream | 355690 | 43287182 ~ 43287259 (+) | True | LOC118964509 |
| XM_036976408.1 | mRNA | downstream | 772527 | 43704019 ~ 43722541 (+) | False | tbpl1 |
| TU400784 | other | upstream | 18891 | 42910886 ~ 42912177 (+) | False | G353820 |
| TU400187 | other | upstream | 479659 | 42451032 ~ 42451409 (+) | True | G353339 |
| TU400176 | other | upstream | 487687 | 42442755 ~ 42443381 (+) | True | G353328 |
| TU400095 | other | upstream | 602431 | 42319700 ~ 42328637 (+) | False | LOC118964483 |
| TU400954 | other | downstream | 322411 | 43253903 ~ 43279017 (+) | True | sh3bgrl2 |
| TU401635 | other | downstream | 679470 | 43610962 ~ 43611562 (+) | True | G354462 |
| TU401825 | other | downstream | 1058631 | 43990123 ~ 43990639 (+) | True | G354630 |
| TU401884 | other | downstream | 1177587 | 44109079 ~ 44110024 (+) | True | myb |
| TU402072 | other | downstream | 1528201 | 44459693 ~ 44461991 (+) | True | G354819 |
