Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412433 |
| length | 555 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | isoc1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 8290855 ~ 8307147 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0003824 | catalytic activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412405 | lncRNA | upstream | 5541 | 8231936 ~ 8301026 (+) | True | G362784 |
| TU412412 | lncRNA | upstream | 58833 | 8246133 ~ 8247734 (+) | True | G362790 |
| TU412411 | lncRNA | upstream | 59249 | 8244701 ~ 8247318 (+) | False | G362789 |
| TU412410 | lncRNA | upstream | 59249 | 8246599 ~ 8247318 (+) | True | G362789 |
| TU412403 | lncRNA | upstream | 75104 | 8230926 ~ 8231463 (+) | True | G362783 |
| TU412441 | lncRNA | downstream | 2407 | 8309554 ~ 8310216 (+) | True | G362812 |
| TU412443 | lncRNA | downstream | 4103 | 8311250 ~ 8311567 (+) | True | G362814 |
| TU412444 | lncRNA | downstream | 4978 | 8312125 ~ 8312430 (+) | True | G362815 |
| TU412448 | lncRNA | downstream | 8502 | 8315649 ~ 8315852 (+) | True | G362819 |
| TU412453 | lncRNA | downstream | 12712 | 8319859 ~ 8320162 (+) | True | G362824 |
| XM_021601559.2 | mRNA | upstream | 17310 | 8250159 ~ 8289257 (+) | True | slc27a6 |
| XM_036976695.1 | mRNA | upstream | 438002 | 7742247 ~ 7868565 (+) | False | mapkap1 |
| XM_036976696.1 | mRNA | upstream | 438002 | 7746330 ~ 7868565 (+) | True | mapkap1 |
| XR_005051634.1 | mRNA | upstream | 564642 | 7730984 ~ 7741925 (+) | True | LOC118964556 |
| XM_036976686.1 | mRNA | upstream | 1274585 | 7002452 ~ 7031982 (+) | True | LOC118964554 |
| XM_036976698.1 | mRNA | downstream | 76498 | 8383645 ~ 8507630 (+) | True | LOC110524944 |
| XM_036976534.1 | mRNA | downstream | 203486 | 8510633 ~ 8515635 (+) | True | minar2 |
| XM_036976699.1 | mRNA | downstream | 210109 | 8517256 ~ 8701336 (+) | False | chsy3 |
| XR_005051936.1 | mRNA | downstream | 400592 | 8707739 ~ 8712041 (+) | True | LOC118964742 |
| XM_021601567.2 | mRNA | downstream | 462637 | 8769784 ~ 8772389 (+) | True | lyrm7 |
| TU412257 | other | upstream | 387002 | 7918922 ~ 7919565 (+) | True | G362662 |
| TU412128 | other | upstream | 614053 | 7690440 ~ 7692514 (+) | True | G362554 |
| TU411797 | other | upstream | 1116748 | 7185926 ~ 7189819 (+) | False | G362297 |
| TU411798 | other | upstream | 1116748 | 7186030 ~ 7189819 (+) | True | G362297 |
| TU411029 | other | upstream | 2465298 | 5803828 ~ 5841269 (+) | False | G361671 |
| TU412732 | other | downstream | 468185 | 8775332 ~ 8846116 (+) | False | cdc42se2 |
| TU414760 | other | downstream | 921691 | 9228838 ~ 9229231 (+) | True | G364850 |
| TU415150 | other | downstream | 1541556 | 9848703 ~ 9849154 (+) | True | G365197 |
| TU416883 | other | downstream | 2669535 | 10976682 ~ 10977152 (+) | True | G366748 |
| TU417154 | other | downstream | 3118495 | 11425642 ~ 11428710 (+) | True | G366973 |
