Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001124216.1 |
| length | 1071 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | st8sia4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 9659812 ~ 9677491 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0097503 | sialylation | biological_process |
| GO:0030173 | integral component of Golgi membrane | cellular_component |
| GO:0003828 | alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity | molecular_function |
| id | description |
|---|---|
| K06614 | SIAT8D; alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8D) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU414879 | lncRNA | upstream | 144673 | 9511683 ~ 9515139 (+) | True | G364942 |
| TU414939 | lncRNA | upstream | 178812 | 9477926 ~ 9481000 (+) | False | G365001 |
| TU414940 | lncRNA | upstream | 178812 | 9477926 ~ 9481000 (+) | False | G365001 |
| TU414941 | lncRNA | upstream | 178812 | 9477926 ~ 9481000 (+) | True | G365001 |
| TU414868 | lncRNA | upstream | 204747 | 9454357 ~ 9455065 (+) | True | G364932 |
| TU415058 | lncRNA | downstream | 1483 | 9678974 ~ 9681569 (+) | True | G365109 |
| TU415025 | lncRNA | downstream | 97374 | 9774865 ~ 9775577 (+) | True | G365077 |
| TU415124 | lncRNA | downstream | 125127 | 9802618 ~ 9802835 (+) | True | G365175 |
| TU415129 | lncRNA | downstream | 150999 | 9828490 ~ 9834144 (+) | True | ca9 |
| TU415143 | lncRNA | downstream | 163084 | 9840575 ~ 9840959 (+) | True | G365190 |
| XM_021601581.2 | mRNA | upstream | 356641 | 9287057 ~ 9303171 (+) | False | pdzph1 |
| XM_036976713.1 | mRNA | upstream | 356641 | 9287064 ~ 9303171 (+) | False | pdzph1 |
| XM_036976712.1 | mRNA | upstream | 356641 | 9289753 ~ 9303171 (+) | True | pdzph1 |
| XM_021601580.2 | mRNA | upstream | 455958 | 9198915 ~ 9203854 (+) | True | LOC110523155 |
| XM_036976707.1 | mRNA | upstream | 560810 | 9048724 ~ 9099002 (+) | True | auh |
| XM_021601309.2 | mRNA | downstream | 13018 | 9690509 ~ 9691996 (+) | True | LOC110522837 |
| XM_036976723.1 | mRNA | downstream | 16557 | 9694048 ~ 9731133 (+) | True | chd1 |
| XR_005051967.1 | mRNA | downstream | 34260 | 9711751 ~ 9711969 (+) | True | LOC118964774 |
| XR_005051972.1 | mRNA | downstream | 47947 | 9725438 ~ 9725565 (+) | True | LOC118964779 |
| XM_036976725.1 | mRNA | downstream | 104964 | 9782455 ~ 9797823 (+) | False | dcp2 |
| TU414760 | other | upstream | 430581 | 9228838 ~ 9229231 (+) | True | G364850 |
| TU412732 | other | upstream | 813696 | 8775332 ~ 8846116 (+) | False | cdc42se2 |
| TU412257 | other | upstream | 1740247 | 7918922 ~ 7919565 (+) | True | G362662 |
| TU412128 | other | upstream | 1967298 | 7690440 ~ 7692514 (+) | True | G362554 |
| TU411798 | other | upstream | 2469993 | 7186030 ~ 7189819 (+) | True | G362297 |
| TU415150 | other | downstream | 171212 | 9848703 ~ 9849154 (+) | True | G365197 |
| TU416883 | other | downstream | 1299191 | 10976682 ~ 10977152 (+) | True | G366748 |
| TU417154 | other | downstream | 1748151 | 11425642 ~ 11428710 (+) | True | G366973 |
| TU417909 | other | downstream | 2200838 | 11878329 ~ 11880035 (+) | True | G367684 |
| TU418769 | other | downstream | 3431205 | 13108696 ~ 13109134 (+) | True | G368440 |
