Item | Value |
---|---|
RNA id | TCONS_00033524 |
length | 28793 |
lncRNA type | antisense_over |
GC content | 0.35 |
exon number | 1 |
gene id | XLOC_015414 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007113.7 |
NCBI id | CM002886.2 |
chromosome length | 59640629 |
location | 23156012 ~ 23184804 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0015804 | neutral amino acid transport | biological_process |
GO:0043297 | apical junction assembly | biological_process |
GO:0015849 | organic acid transport | biological_process |
GO:0070830 | bicellular tight junction assembly | biological_process |
GO:0045216 | cell-cell junction organization | biological_process |
GO:0046942 | carboxylic acid transport | biological_process |
GO:0007043 | cell-cell junction assembly | biological_process |
GO:0009410 | response to xenobiotic stimulus | biological_process |
GO:0034329 | cell junction assembly | biological_process |
GO:0034330 | cell junction organization | biological_process |
GO:0071466 | cellular response to xenobiotic stimulus | biological_process |
GO:0015711 | organic anion transport | biological_process |
GO:0006820 | anion transport | biological_process |
GO:0120192 | tight junction assembly | biological_process |
GO:0120193 | tight junction organization | biological_process |
GO:0006865 | amino acid transport | biological_process |
GO:0005911 | cell-cell junction | cellular_component |
GO:0030054 | cell junction | cellular_component |
GO:0015171 | amino acid transmembrane transporter activity | molecular_function |
GO:0015175 | neutral amino acid transmembrane transporter activity | molecular_function |
GO:0015179 | L-amino acid transmembrane transporter activity | molecular_function |
GO:0008514 | organic anion transmembrane transporter activity | molecular_function |
GO:0046943 | carboxylic acid transmembrane transporter activity | molecular_function |
GO:0015349 | thyroid hormone transmembrane transporter activity | molecular_function |
GO:0005342 | organic acid transmembrane transporter activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00033523 | lncRNA | upstream | 129034 | 23025321 ~ 23026978 (+) | True | XLOC_015410 |
TCONS_00033522 | lncRNA | upstream | 141396 | 23006792 ~ 23014616 (+) | False | XLOC_015409 |
TCONS_00030845 | lncRNA | upstream | 141396 | 23011833 ~ 23014616 (+) | True | XLOC_015409 |
TCONS_00030842 | lncRNA | upstream | 141968 | 23006792 ~ 23014044 (+) | False | XLOC_015409 |
TCONS_00033521 | lncRNA | upstream | 163983 | 22985130 ~ 22992029 (+) | False | XLOC_015408 |
TCONS_00033526 | lncRNA | downstream | 221649 | 23406453 ~ 23410848 (+) | False | XLOC_015418 |
TCONS_00033528 | lncRNA | downstream | 221649 | 23406453 ~ 23442528 (+) | False | XLOC_015418 |
TCONS_00033527 | lncRNA | downstream | 221649 | 23406453 ~ 23442528 (+) | False | XLOC_015418 |
TCONS_00033529 | lncRNA | downstream | 230079 | 23414883 ~ 23416355 (+) | False | XLOC_015419 |
TCONS_00033530 | lncRNA | downstream | 230079 | 23414883 ~ 23421047 (+) | True | XLOC_015419 |
TCONS_00030852 | mRNA | upstream | 23878 | 23130389 ~ 23132134 (+) | True | XLOC_015413 |
TCONS_00030851 | mRNA | upstream | 52863 | 23081402 ~ 23103149 (+) | True | XLOC_015412 |
TCONS_00030850 | mRNA | upstream | 56368 | 23081248 ~ 23099644 (+) | False | XLOC_015412 |
TCONS_00030849 | mRNA | upstream | 56369 | 23081247 ~ 23099643 (+) | False | XLOC_015412 |
TCONS_00030846 | mRNA | upstream | 77264 | 23039041 ~ 23078748 (+) | False | XLOC_015411 |
TCONS_00030854 | mRNA | downstream | 38135 | 23222939 ~ 23293501 (+) | False | XLOC_015415 |
TCONS_00030857 | mRNA | downstream | 166650 | 23351454 ~ 23361933 (+) | False | XLOC_015417 |
TCONS_00030858 | mRNA | downstream | 166729 | 23351533 ~ 23355705 (+) | False | XLOC_015417 |
TCONS_00030859 | mRNA | downstream | 167498 | 23352302 ~ 23361009 (+) | True | XLOC_015417 |
TCONS_00030860 | mRNA | downstream | 297994 | 23482798 ~ 23484348 (+) | True | XLOC_015421 |
TCONS_00030841 | other | upstream | 164491 | 22986282 ~ 22991521 (+) | True | XLOC_015408 |
TCONS_00030832 | other | upstream | 489312 | 22660071 ~ 22666700 (+) | True | XLOC_015401 |
TCONS_00030805 | other | upstream | 1780418 | 21375467 ~ 21375594 (+) | True | XLOC_015384 |
TCONS_00030797 | other | upstream | 1912994 | 21186377 ~ 21243018 (+) | False | XLOC_015381 |
TCONS_00030793 | other | upstream | 1978347 | 21175950 ~ 21177665 (+) | False | XLOC_015380 |
TCONS_00030855 | other | downstream | 72973 | 23257777 ~ 23257897 (+) | True | XLOC_015416 |
TCONS_00030856 | other | downstream | 89528 | 23274332 ~ 23274781 (+) | True | XLOC_015415 |
TCONS_00030864 | other | downstream | 495069 | 23679873 ~ 23679989 (+) | True | XLOC_015426 |
TCONS_00030870 | other | downstream | 828446 | 24013250 ~ 24014943 (+) | True | XLOC_015433 |
TCONS_00030885 | other | downstream | 1163785 | 24348589 ~ 24351040 (+) | True | XLOC_015440 |