Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU421776 |
| length | 534 |
| lncRNA type | read_through |
| GC content | 0.41 |
| exon number | 2 |
| gene id | uck1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15117198 ~ 15187954 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0044206 | UMP salvage | biological_process |
| GO:0044211 | CTP salvage | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | molecular_function |
| GO:0004849 | uridine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU421837 | lncRNA | upstream | 14872 | 15080692 ~ 15102326 (+) | True | G371172 |
| TU421835 | lncRNA | upstream | 16820 | 15077707 ~ 15100378 (+) | True | G371171 |
| TU421834 | lncRNA | upstream | 28658 | 15067025 ~ 15088540 (+) | True | G371170 |
| TU421793 | lncRNA | upstream | 41498 | 15075035 ~ 15075700 (+) | True | LOC110518158 |
| TU421817 | lncRNA | upstream | 60980 | 15015821 ~ 15056218 (+) | True | G371159 |
| TU421874 | lncRNA | downstream | 4995 | 15192949 ~ 15193278 (+) | True | G371206 |
| TU422064 | lncRNA | downstream | 68148 | 15256102 ~ 15256318 (+) | True | G371367 |
| TU422121 | lncRNA | downstream | 159174 | 15347128 ~ 15347847 (+) | True | G371420 |
| TU422153 | lncRNA | downstream | 230539 | 15418493 ~ 15418732 (+) | True | G371452 |
| TU422154 | lncRNA | downstream | 231023 | 15418977 ~ 15419301 (+) | True | G371453 |
| XM_036976887.1 | mRNA | upstream | 20441 | 15086878 ~ 15096757 (+) | True | LOC110519478 |
| XM_036976894.1 | mRNA | upstream | 41640 | 15065627 ~ 15075558 (+) | False | LOC110518158 |
| XM_036976895.1 | mRNA | upstream | 62845 | 15047739 ~ 15054353 (+) | False | LOC110519479 |
| XM_036976889.1 | mRNA | upstream | 82609 | 15027803 ~ 15034589 (+) | True | LOC110523290 |
| XM_036976890.1 | mRNA | upstream | 102586 | 15007790 ~ 15014612 (+) | False | LOC110518391 |
| XM_036976911.1 | mRNA | downstream | 276601 | 15464555 ~ 15591443 (+) | False | LOC110523300 |
| XM_036976909.1 | mRNA | downstream | 276755 | 15464709 ~ 15591443 (+) | False | LOC110523300 |
| XM_036976910.1 | mRNA | downstream | 276755 | 15464709 ~ 15591443 (+) | True | LOC110523300 |
| XM_036976915.1 | mRNA | downstream | 562237 | 15750191 ~ 15756122 (+) | False | st6galnac4 |
| XM_021601899.2 | mRNA | downstream | 564950 | 15752904 ~ 15756190 (+) | False | st6galnac4 |
| TU421788 | other | upstream | 63642 | 15048178 ~ 15053556 (+) | True | LOC110519479 |
| TU421530 | other | upstream | 311727 | 14804661 ~ 14805471 (+) | True | LOC118964542 |
| TU420985 | other | upstream | 749037 | 14367672 ~ 14368161 (+) | True | G370414 |
| TU420951 | other | upstream | 791303 | 14321104 ~ 14325895 (+) | True | G370382 |
| TU420927 | other | upstream | 858065 | 14255803 ~ 14259133 (+) | True | G370360 |
| TU422347 | other | downstream | 603605 | 15791559 ~ 15795122 (+) | False | G371615 |
| TU423147 | other | downstream | 1031652 | 16219606 ~ 16220933 (+) | True | G372281 |
| TU423245 | other | downstream | 1547688 | 16735642 ~ 16738500 (+) | True | G372373 |
| TU423600 | other | downstream | 1682480 | 16870434 ~ 16882185 (+) | False | G372618 |
| TU423601 | other | downstream | 1682480 | 16870434 ~ 16882185 (+) | True | G372618 |
